Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of XylR in Bacteroides ovatus ATCC 8483

Properties
Regulator type: Transcription factor
TF locus tag: BACOVA_02532
Regulator family: NrtR
Regulation mode: repressor
Biological process: Xylose utilization
Effector: Xylose
Regulog: XylR - Bacteroidaceae
Statistics of regulated genes:
- Genes 6
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 43 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -128
Score: 5.6
Sequence: CTTATTGTATCACAAACAAGAAG
Locus tag: BACOVA_01706
Name: tkt
Funciton: Transketolase (EC 2.2.1.1)
Locus tag: BACOVA_01705
Name: rpi
Funciton: Ribose 5-phosphate isomerase B (EC 5.3.1.6)
tkt
Transketolase (EC 2.2.1.1)
rpi
Ribose 5-phosphate isomerase B (EC 5.3.1.6)

Position: -279
Score: 6.1
Sequence: CATATCGTTTAAAATACAATAAG
Position: -195
Score: 5.6
Sequence: GTTTTTGTACTTTATACAATTAC
Position: -149
Score: 5.4
Sequence: CATATTGTAATTCGTAAGATAAC
Position: -116
Score: 5.4
Sequence: CATATTGTAGAATGTATGATATG
Locus tag: BACOVA_02532
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BACOVA_02533
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BACOVA_02534
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BACOVA_02535
Name: xylE
Funciton: D-xylose proton-symporter XylE
xylR
Predicted regulator of xylose utilization, NrtR family
xylB
Xylulose kinase (EC 2.7.1.17)
xylA
Xylose isomerase (EC 5.3.1.5)
xylE
D-xylose proton-symporter XylE
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD