Regulon of KdgR in Bacteroides plebeius DSM 17135
| Regulator type: | Transcription factor |
| TF locus tag: | BACPLE_00833 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Glucuronate utilization; Galacturonate utilization |
| Effector: | 2-keto-3-deoxygluconate |
| Regulog: | KdgR - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 3 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - LacI
- By effector - 2-keto-3-deoxygluconate
- By pathway - Glucuronate utilization
- By pathway - Galacturonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -154
Score: 4.6 Sequence: TCCGTGTGCGTAAACGAA
Locus tag: BACPLE_00506
Name: sgcC Funciton: putative phosphotransferase enzyme II, C component
Locus tag: BACPLE_00505
Name: kduI2 Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: BACPLE_00504
Name: hexT Funciton: Hexuronate transporter |
|||
|
sgcC
|
putative phosphotransferase enzyme II, C component
|
||
|
kduI2
|
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
|
||
|
hexT
|
Hexuronate transporter
|
||
|
Position: -123
Score: 6.1 Sequence: TTTGTGTACGCACACAAA
Locus tag: BACPLE_00833
Name: kdgR Funciton: Predicted transcriptional regulator for altronate catabolism, LacI family
Locus tag: BACPLE_00834
Name: uxaA Funciton: Altronate hydrolase (EC 4.2.1.7) |
|||
|
kdgR
|
Predicted transcriptional regulator for altronate catabolism, LacI family
|
||
|
uxaA
|
Altronate hydrolase (EC 4.2.1.7)
|
||
|
Position: -112
Score: 6.1 Sequence: TTTGTGTGCGTACACAAA
Locus tag: BACPLE_00831
Name: kdgK Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Locus tag: BACPLE_00830
Name: kdgA Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
|||
|
kdgK
|
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
|
||
|
kdgA
|
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |