Profile of regulator KdgR in Bacteroidaceae
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Glucuronate utilization; Galacturonate utilization |
| Effector: | 2-keto-3-deoxygluconate |
| Regulog: | KdgR - Bacteroidaceae |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - LacI
- By effector - 2-keto-3-deoxygluconate
- By pathway - Glucuronate utilization
- By pathway - Galacturonate utilization
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Bacteroides cellulosilyticus DSM 14838 | |||||
| BACCELL_03118 | hexT | -170 | 4.6 | TTCGTGTGCGAGAACGAG | |
| BACCELL_03118 | hexT | -154 | 4.7 | AGTGTTTTCGTGCACGAT | |
| BACCELL_02166 | kduI1 | -64 | 4.8 | ATCGTGTACGTAAACGAA | |
| BACCELL_04099 | kdgR | -154 | 5.6 | ATTGTGTGCGGACACAAC | |
| Bacteroides dorei DSM 17855 | |||||
| BACDOR_03279 | sgcC | -25 | 4.5 | TTCGTGTGCGAAAACGGT | |
| BACDOR_03279 | sgcC | -3 | 4.5 | TTTGTGCACGATAACGAT | |
| BACDOR_02921 | kdgK | -228 | 5.5 | ATTGTGCTCGTACACACT | |
| BACDOR_02921 | kdgK | -145 | 5.4 | TTTGTGCACGCACACGGA | |
| BACDOR_02922 | kdgR | -115 | 5.4 | TCCGTGTGCGTGCACAAA | |
| BACDOR_02922 | kdgR | -32 | 5.5 | AGTGTGTACGAGCACAAT | |
| Bacteroides eggerthii DSM 20697 | |||||
| BACEGG_03270 | kduI1 | -64 | 4.4 | ATCGTGTACGTAAACGAC | |
| BACEGG_00862 | sgcC | -182 | 4.9 | TTCGTGTACGAAAACGAA | |
| BACEGG_00862 | sgcC | -160 | 4.1 | TTTGTGCACGATAACGAC | |
| BACEGG_01788 | kdgK | -227 | 6 | TTTGTGTTCGTACACAAT | |
| BACEGG_01788 | kdgK | -145 | 5.9 | TTTGTGCCCGCACACGAA | |
| BACEGG_01787 | kdgR | 39 | 5.9 | TTCGTGTGCGGGCACAAA | |
| BACEGG_01787 | kdgR | 121 | 6 | ATTGTGTACGAACACAAA | |
| Bacteroides fragilis NCTC 9343 | |||||
| BF0082 | kduI1 | -61 | 4.1 | GTCGTGTGCGTAAACGGA | |
| BF0809 | hexT | -198 | 4.5 | GTCGTGTGCGAAAACGAT | |
| BF0809 | hexT | -176 | 4.6 | ATTGTGTTCGATAACGAA | |
| BF2719 | kdgK | -228 | 5.7 | TTTGTGCCCGGACACACT | |
| BF2719 | kdgK | -146 | 5.5 | TTTGTGTCCGCACACGGA | |
| BF2720 | kdgR | -125 | 5.5 | TCCGTGTGCGGACACAAA | |
| BF2720 | kdgR | -43 | 5.7 | AGTGTGTCCGGGCACAAA | |
| Bacteroides ovatus ATCC 8483 | |||||
| BACOVA_00140 | kduI1 | -66 | 4.8 | ATCGTGTACGTAAACGAA | |
| BACOVA_04898 | sgcC | -193 | 4.5 | TTCGTGCACGGAAACGAC | |
| BACOVA_04898 | sgcC | -171 | 4.3 | TTTGTGCACGCAAACGTC | |
| BACOVA_03830 | kdgK | -228 | 6 | TTTGTGCTCGCACACAAT | |
| BACOVA_03830 | kdgK | -146 | 5.9 | TTTGTGCCCGCACACGAA | |
| BACOVA_03831 | kdgR | -125 | 5.9 | TTCGTGTGCGGGCACAAA | |
| BACOVA_03831 | kdgR | -43 | 6 | ATTGTGTGCGAGCACAAA | |
| Bacteroides plebeius DSM 17135 | |||||
| BACPLE_00506 | sgcC | -154 | 4.6 | TCCGTGTGCGTAAACGAA | |
| BACPLE_00831 | kdgK | -112 | 6.1 | TTTGTGTGCGTACACAAA | |
| BACPLE_00833 | kdgR | -123 | 6.1 | TTTGTGTACGCACACAAA | |
| Bacteroides stercoris ATCC 43183 | |||||
| BACSTE_02324 | kduI1 | -65 | 4.4 | ATCGTGTACGTAAACGAC | |
| BACSTE_03306 | sgcC | -182 | 4.9 | TTCGTGTACGAAAACGAA | |
| BACSTE_03306 | sgcC | -160 | 4.1 | TTTGTGCACGATAACGAC | |
| BACSTE_00505 | kdgK | -228 | 5.9 | TTTGTGCCCGTGCACAAT | |
| BACSTE_00505 | kdgK | -146 | 5.9 | TTTGTGCCCGCACACGAA | |
| BACSTE_00506 | kdgR | 39 | 5.9 | TTCGTGTGCGGGCACAAA | |
| BACSTE_00506 | kdgR | 121 | 5.9 | ATTGTGCACGGGCACAAA | |
| Bacteroides thetaiotaomicron VPI-5482 | |||||
| BT3231 | kduI1 | -66 | 4.8 | ATCGTGTACGTAAACGAT | |
| BT4107 | sgcC | -194 | 4.5 | TTCGTGCACGGAAACGAC | |
| BT4107 | sgcC | -172 | 4.2 | TTTGTGCACGTAAACGTC | |
| BT0488 | kdgK | -228 | 5.6 | TATGTGCTCGCACACAAT | |
| BT0488 | kdgK | -146 | 5.9 | TTTGTGCCCGCACACGAA | |
| BT0487 | kdgR | -124 | 5.9 | TTCGTGTGCGGGCACAAA | |
| BT0487 | kdgR | -42 | 5.6 | ATTGTGTGCGAGCACATA | |
| Bacteroides uniformis ATCC 8492 | |||||
| BACUNI_04204 | kduI1 | -64 | 4.8 | ATCGTGTACGCAAACGAT | |
| BACUNI_03601 | sgcC | -183 | 4.6 | TTCGTGTACGAAAACGAG | |
| BACUNI_03601 | sgcC | -161 | 4.1 | TTTGTGCACGATAACGAC | |
| BACUNI_01828 | kdgK | -231 | 5.6 | CTTGTGCTCGCACACAAT | |
| BACUNI_01828 | kdgK | -149 | 5.8 | TTTGTGCCCGTACACGAA | |
| BACUNI_01826 | kdgR | -210 | 5.8 | TTCGTGTACGGGCACAAA | |
| BACUNI_01826 | kdgR | -128 | 5.6 | ATTGTGTGCGAGCACAAG | |
| Bacteroides vulgatus ATCC 8482 | |||||
| BVU_1796 | sgcC | -181 | 4.5 | TTCGTGTGCGAAAACGGT | |
| BVU_1796 | sgcC | -159 | 4.5 | TTTGTGCACGATAACGAT | |
| BVU_3055 | kdgK | -228 | 5.5 | ATTGTGCTCGTGCACACT | |
| BVU_3055 | kdgK | -145 | 5.4 | TTTGTGCACGCACACGGA | |
| BVU_1120 | susC_Kdg | -181 | 5.4 | TTTGTGTGCGTACACGGA | |
| BVU_3054 | kdgR | -116 | 5.4 | TCCGTGTGCGTGCACAAA | |
| BVU_3054 | kdgR | -33 | 5.5 | AGTGTGCACGAGCACAAT | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |