Regulon of KdgR in Bacteroides fragilis NCTC 9343
| Regulator type: | Transcription factor |
| TF locus tag: | BF2720 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Glucuronate utilization; Galacturonate utilization |
| Effector: | 2-keto-3-deoxygluconate |
| Regulog: | KdgR - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - LacI
- By effector - 2-keto-3-deoxygluconate
- By pathway - Glucuronate utilization
- By pathway - Galacturonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -61
Score: 4.1 Sequence: GTCGTGTGCGTAAACGGA
Locus tag: BF0082
Name: kduI1 Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: BF0083
Name: kduD Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
Locus tag: BF0084
Name: BT3233 Funciton: putative secreted glycosyl hydrolase |
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kduI1
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4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
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kduD
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2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
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BT3233
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putative secreted glycosyl hydrolase
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Position: -198
Score: 4.5 Sequence: GTCGTGTGCGAAAACGAT
Position: -176
Score: 4.6 Sequence: ATTGTGTTCGATAACGAA
Locus tag: BF0809
Name: hexT Funciton: Hexuronate transporter |
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hexT
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Hexuronate transporter
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Position: -125
Score: 5.5 Sequence: TCCGTGTGCGGACACAAA
Position: -43
Score: 5.7 Sequence: AGTGTGTCCGGGCACAAA
Locus tag: BF2720
Name: kdgR Funciton: Predicted transcriptional regulator for altronate catabolism, LacI family |
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kdgR
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Predicted transcriptional regulator for altronate catabolism, LacI family
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Position: -228
Score: 5.7 Sequence: TTTGTGCCCGGACACACT
Position: -146
Score: 5.5 Sequence: TTTGTGTCCGCACACGGA
Locus tag: BF2719
Name: kdgK Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Locus tag: BF2718
Name: kdgA Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
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kdgK
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2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
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kdgA
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2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |