Regulon of KdgR in Bacteroides eggerthii DSM 20697
| Regulator type: | Transcription factor |
| TF locus tag: | BACEGG_01787 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Glucuronate utilization; Galacturonate utilization |
| Effector: | 2-keto-3-deoxygluconate |
| Regulog: | KdgR - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - LacI
- By effector - 2-keto-3-deoxygluconate
- By pathway - Glucuronate utilization
- By pathway - Galacturonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -182
Score: 4.9 Sequence: TTCGTGTACGAAAACGAA
Position: -160
Score: 4.1 Sequence: TTTGTGCACGATAACGAC
Locus tag: BACEGG_00862
Name: sgcC Funciton: putative phosphotransferase enzyme II, C component
Locus tag: BACEGG_00861
Name: kduI2 Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: BACEGG_00860
Name: hexT Funciton: Hexuronate transporter |
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sgcC
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putative phosphotransferase enzyme II, C component
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kduI2
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4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
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hexT
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Hexuronate transporter
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Position: -227
Score: 6 Sequence: TTTGTGTTCGTACACAAT
Position: -145
Score: 5.9 Sequence: TTTGTGCCCGCACACGAA
Locus tag: BACEGG_01788
Name: kdgK Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Locus tag: BACEGG_01789
Name: null Funciton: hypothetical protein
Locus tag: BACEGG_01790
Name: kdgA Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
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kdgK
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2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
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hypothetical protein
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kdgA
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2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
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Position: -64
Score: 4.4 Sequence: ATCGTGTACGTAAACGAC
Locus tag: BACEGG_03270
Name: kduI1 Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: BACEGG_03269
Name: kduD Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
Locus tag: BACEGG_03268
Name: BT3233 Funciton: putative secreted glycosyl hydrolase |
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kduI1
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4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
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kduD
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2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
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BT3233
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putative secreted glycosyl hydrolase
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Position: 39
Score: 5.9 Sequence: TTCGTGTGCGGGCACAAA
Position: 121
Score: 6 Sequence: ATTGTGTACGAACACAAA
Locus tag: BACEGG_01787
Name: kdgR Funciton: Predicted transcriptional regulator for altronate catabolism, LacI family
Locus tag: BACEGG_01786
Name: uxaA Funciton: Altronate hydrolase (EC 4.2.1.7) |
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kdgR
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Predicted transcriptional regulator for altronate catabolism, LacI family
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uxaA
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Altronate hydrolase (EC 4.2.1.7)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |