Regulon of Fur in Shewanella sp ANA-3
Regulator type: | Transcription factor |
TF locus tag: | Shewana3_1716 |
Regulator family: | FUR |
Regulation mode: | repressor (activator) |
Biological process: | Iron homeostasis |
Effector: | Iron ion, (Fe2+) |
Regulog: | Fur - Shewanellaceae |
Statistics of regulated genes: | |
- Genes | 65 |
- Operons | 36 |
Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |

Member of regulog collections
- By taxonomy - Shewanellaceae
- By trascription factor - FUR
- By TF family - FUR
- By effector - Iron ion, (Fe2+)
- By pathway - Iron homeostasis
Locus Tag | Name | Function | |
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Position: -121
Score: 5.4 Sequence: AATTGAAAACTATTATCGTTA
Locus tag: Shewana3_2671
Name: feoA Funciton: Ferrous iron transport protein A
Locus tag: Shewana3_2670
Name: feoB Funciton: Ferrous iron transport protein B |
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feoA
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Ferrous iron transport protein A
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feoB
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Ferrous iron transport protein B
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Position: -66
Score: 5.5 Sequence: TATTGATAACAATTCGCATTA
Locus tag: Shewana3_2196
Name: COG3182 Funciton: PepSY-associated TM helix domain-containing protein
Locus tag: Shewana3_2195
Name: Sfri_2547 Funciton: Conserved hypothetical protein |
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COG3182
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PepSY-associated TM helix domain-containing protein
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Sfri_2547
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Conserved hypothetical protein
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Position: -32
Score: 5.6 Sequence: AAATGATATTGATTCTCGTTT
Locus tag: Shewana3_1959
Name: null Funciton: Two component transcriptional regulator, Winged helix family |
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Two component transcriptional regulator, Winged helix family
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Position: -71
Score: 5.6 Sequence: GACTGATAATAATTTTCATTT
Locus tag: Shewana3_2609
Name: null Funciton: Hypothetical protein |
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Hypothetical protein
|
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Position: -98
Score: 5.5 Sequence: CAATAAAAATCGTTATCATTT
Locus tag: Shewana3_0286
Name: SO4423.1 Funciton: TonB-dependent ferric achromobactin receptor |
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SO4423.1
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TonB-dependent ferric achromobactin receptor
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Position: -224
Score: 6.1 Sequence: AAATGAGAATGATTTGCATTT
Locus tag: Shewana3_1510
Name: pubA Funciton: Putrescine monooxygenase, PubA
Locus tag: Shewana3_1509
Name: pubB Funciton: N-hydroxyputrescine-succinyl CoA transferase, PubB
Locus tag: Shewana3_1508
Name: pubC Funciton: NTP-dependent putrebactin synthetase, PubC
Locus tag: Shewana3_1507
Name: putA Funciton: TonB-dependent ferric putrebactin siderophore receptor, PutA
Locus tag: Shewana3_1506
Name: putB Funciton: Ferric putrebactin reductase, PutB |
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pubA
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Putrescine monooxygenase, PubA
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pubB
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N-hydroxyputrescine-succinyl CoA transferase, PubB
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pubC
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NTP-dependent putrebactin synthetase, PubC
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putA
|
TonB-dependent ferric putrebactin siderophore receptor, PutA
|
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putB
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Ferric putrebactin reductase, PutB
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Position: -125
Score: 5.4 Sequence: TAATGAGAATGCTTTTTATCT
Locus tag: Shewana3_0946
Name: bfr2 Funciton: Bacterioferritin subunit 2
Locus tag: Shewana3_0947
Name: bfr1 Funciton: Bacterioferritin subunit 1 |
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bfr2
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Bacterioferritin subunit 2
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bfr1
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Bacterioferritin subunit 1
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Position: -107
Score: 5.5 Sequence: AAATGATAATAATTATTGATT
Locus tag: Shewana3_0716
Name: null Funciton: TonB-dependent siderophore receptor
Locus tag: Shewana3_0717
Name: piuC Funciton: Iron-uptake factor PiuC |
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TonB-dependent siderophore receptor
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piuC
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Iron-uptake factor PiuC
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Position: -30
Score: 4.9 Sequence: GATTGAAAATGATTTTCACTG
Locus tag: Shewana3_2707
Name: null Funciton: Phosphomannomutase (EC 5.4.2.8) clustering with Aga operon |
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Phosphomannomutase (EC 5.4.2.8) clustering with Aga operon
|
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Position: -48
Score: 5.8 Sequence: AGATGAAAATCATTATCATTC
Locus tag: Shewana3_2944
Name: null Funciton: TonB-dependent receptor |
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TonB-dependent receptor
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Position: -67
Score: 5.8 Sequence: AGTTGAGAATAATTCTCATCT
Locus tag: Shewana3_1485
Name: null Funciton: Hypothetical inner membrane protein |
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Hypothetical inner membrane protein
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Position: -81
Score: 5.6 Sequence: AGGTGAGAATTATTCTCATCT
Locus tag: Shewana3_2862
Name: null Funciton: TonB-dependent heme receptor |
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TonB-dependent heme receptor
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Position: -54
Score: 5.3 Sequence: ATTTGATAAGCGTTTTCATTT
Locus tag: Shewana3_0581
Name: bfd Funciton: Bacterioferritin-associated ferredoxin |
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bfd
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Bacterioferritin-associated ferredoxin
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Position: -98
Score: 6 Sequence: AAATGGAAATCATTATCATTT
Locus tag: Shewana3_3236
Name: tonB Funciton: TonB mediated energy transduction system, energy transducer component, TonB
Locus tag: Shewana3_3237
Name: exbB Funciton: TonB mediated energy transduction system, inner membrane component, ExbB
Locus tag: Shewana3_3238
Name: exbD Funciton: TonB mediated energy transduction system, inner membrane component, ExbD
Locus tag: Shewana3_3239
Name: hmuB Funciton: ABC hemin transporter, periplasmic ligand-binding subunit, HmuB
Locus tag: Shewana3_3240
Name: hmuC Funciton: ABC hemin transporter, inner membrane subunit, HmuC
Locus tag: Shewana3_3241
Name: hmuD Funciton: ABC hemin transporter, ATPase subunit, HmuD |
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tonB
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TonB mediated energy transduction system, energy transducer component, TonB
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exbB
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TonB mediated energy transduction system, inner membrane component, ExbB
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exbD
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TonB mediated energy transduction system, inner membrane component, ExbD
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hmuB
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ABC hemin transporter, periplasmic ligand-binding subunit, HmuB
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hmuC
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ABC hemin transporter, inner membrane subunit, HmuC
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hmuD
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ABC hemin transporter, ATPase subunit, HmuD
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Position: -194
Score: 5.6 Sequence: AATTAATAACAATTCTCAATT
Locus tag: Shewana3_0299
Name: Shewmr4_0304 Funciton: TonB-dependent siderophore receptor |
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Shewmr4_0304
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TonB-dependent siderophore receptor
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Position: -64
Score: 5.3 Sequence: TAATGAGATTTATTCTTATTC
Locus tag: Shewana3_2675
Name: omcA Funciton: Surface localized decaheme cytochrome c lipoprotein, OmcA |
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omcA
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Surface localized decaheme cytochrome c lipoprotein, OmcA
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Position: -68
Score: 5.7 Sequence: AAATAAAAACAATTCTTATTT
Locus tag: Shewana3_4127
Name: null Funciton: TonB-dependent siderophore receptor |
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TonB-dependent siderophore receptor
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Position: -326
Score: 5.4 Sequence: TAACGATAATAGTTTTCAATT
Locus tag: Shewana3_2672
Name: mtrD Funciton: Periplasmic decaheme cytochrome c, MtrD
Locus tag: Shewana3_2673
Name: mtrE Funciton: Outer membrane protein, MtrE
Locus tag: Shewana3_2674
Name: mtrF Funciton: Surface localized decaheme cytochrome c lipoprotein, MtrF |
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mtrD
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Periplasmic decaheme cytochrome c, MtrD
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mtrE
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Outer membrane protein, MtrE
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mtrF
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Surface localized decaheme cytochrome c lipoprotein, MtrF
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Position: -132
Score: 5.7 Sequence: AAATGAAAATCATTTTTATCA
Locus tag: Shewana3_0132
Name: ftn Funciton: Ferritin, Ftn |
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ftn
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Ferritin, Ftn
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Position: -99
Score: 6 Sequence: AAATGAGAATTATTGTCATCT
Locus tag: Shewana3_2551
Name: null Funciton: TonB-dependent siderophore receptor |
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TonB-dependent siderophore receptor
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Position: -171
Score: 6 Sequence: AAATGATAATGATTTCCATTT
Locus tag: Shewana3_3235
Name: hmuA Funciton: TonB-dependent haem/haemoglobin receptor, HmuA
Locus tag: Shewana3_3234
Name: huvX Funciton: Putative heme iron utilization protein
Locus tag: Shewana3_3233
Name: null Funciton: Pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein |
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hmuA
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TonB-dependent haem/haemoglobin receptor, HmuA
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huvX
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Putative heme iron utilization protein
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Pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein
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Position: -60
Score: 6 Sequence: TAATGAGAATTGTTATCATCT
Locus tag: Shewana3_4124
Name: null Funciton: Conserved hypothetical inner membrane protein |
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Conserved hypothetical inner membrane protein
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Position: -181
Score: 5.6 Sequence: TGTTGATAATAAATATCATTT
Locus tag: Shewana3_1014
Name: null Funciton: Inner membrane protein with PepSY TM helix
Locus tag: Shewana3_1015
Name: null Funciton: Putative exported protein
Locus tag: Shewana3_1016
Name: null Funciton: putative exported protein |
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Inner membrane protein with PepSY TM helix
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Putative exported protein
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putative exported protein
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Position: -152
Score: 5.1 Sequence: TATTGCGAACTGTTCTCATCA
Locus tag: Shewana3_0445
Name: null Funciton: Iron-regulated inner membrane protein
Locus tag: Shewana3_0446
Name: null Funciton: Iron-regulated inner membrane protein
Locus tag: Shewana3_0447
Name: null Funciton: Iron-regulated membrane protein |
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Iron-regulated inner membrane protein
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Iron-regulated inner membrane protein
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Iron-regulated membrane protein
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Position: -63
Score: 5.2 Sequence: AAATGCAAATCGTTCTCAATG
Locus tag: Shewana3_0952
Name: null Funciton: TonB-dependent siderophore receptor |
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TonB-dependent siderophore receptor
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Position: -47
Score: 5.2 Sequence: ATTTAAGAATAATTATCATTC
Locus tag: Shewana3_1861
Name: null Funciton: TonB-dependent receptor |
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TonB-dependent receptor
|
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Position: -49
Score: 6.1 Sequence: TATTGAAAATTATTATCATTT
Locus tag: Shewana3_3929
Name: null Funciton: TonB-dependent receptor |
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TonB-dependent receptor
|
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Position: -99
Score: 5.8 Sequence: AAATGATATTGGTTATCATCT
Locus tag: Shewana3_3923
Name: viuA Funciton: TonB-dependent receptor |
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viuA
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TonB-dependent receptor
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Position: -76
Score: 5.7 Sequence: AACTGATAACTATTATCATTA
Locus tag: Shewana3_3517
Name: fbpA Funciton: ABC iron(III) transporter, periplasmic ligand-binding subunit, FbpA
Locus tag: Shewana3_3516
Name: fbpB Funciton: ABC iron(III) transporter, inner membrane subunit, FbpB
Locus tag: Shewana3_3515
Name: fbpC Funciton: ABC iron(III) transporter, ATPase subunit, FbpC |
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fbpA
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ABC iron(III) transporter, periplasmic ligand-binding subunit, FbpA
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fbpB
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ABC iron(III) transporter, inner membrane subunit, FbpB
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fbpC
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ABC iron(III) transporter, ATPase subunit, FbpC
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Position: -84
Score: 4.9 Sequence: TAATGATAATGATTTGCGTTG
Locus tag: Shewana3_0919
Name: Sama_2655 Funciton: Conserved hypothetical protein
Locus tag: Shewana3_0920
Name: Sama_2656 Funciton: FMN-binding domain protein
Locus tag: Shewana3_0921
Name: Sama_2657 Funciton: ApbE family protein, putative
Locus tag: Shewana3_0922
Name: Sama_2658 Funciton: Hypothetical protein |
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Sama_2655
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Conserved hypothetical protein
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Sama_2656
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FMN-binding domain protein
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Sama_2657
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ApbE family protein, putative
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Sama_2658
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Hypothetical protein
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Position: -59
Score: 5 Sequence: TTATGATAATGACTATTATTT
Locus tag: Shewana3_1178
Name: null Funciton: Cytochrome B561
Locus tag: Shewana3_1179
Name: yceI Funciton: Protein yceI precursor |
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Cytochrome B561
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yceI
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Protein yceI precursor
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Position: -44
Score: 6.1 Sequence: AAATGATAATGATTATCACTT
Locus tag: Shewana3_1202
Name: null Funciton: Hypothetical inner membrane protein |
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Hypothetical inner membrane protein
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Position: -86
Score: 4.8 Sequence: AAATCGAATCCATTCTCATTA
Locus tag: Shewana3_4052
Name: null Funciton: Hypothetical outer membrane protein |
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Hypothetical outer membrane protein
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Position: -44
Score: 5 Sequence: AAATGCGAATAATTAGCGATT
Locus tag: Shewana3_2237
Name: null Funciton: Signalling protein with EAL domain |
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Signalling protein with EAL domain
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Position: -177
Score: 5.7 Sequence: AAATGATATTGTTTATCATTT
Locus tag: Shewana3_1149
Name: null Funciton: Conserved hypothetical protein
Locus tag: Shewana3_1148
Name: null Funciton: Iron-regulated membrane protein
Locus tag: Shewana3_1147
Name: null Funciton: Conserved hypothetical inner membrane protein |
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Conserved hypothetical protein
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Iron-regulated membrane protein
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Conserved hypothetical inner membrane protein
|
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Position: -177
Score: 5.8 Sequence: GAATGATAATAATTGTCATTT
Locus tag: Shewana3_1514
Name: null Funciton: Periplasmic esterase |
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Periplasmic esterase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |