Regulon of Fur in Shewanella putrefaciens CN-32

Properties
Regulator type:	Transcription factor
TF locus tag:	Sputcn32_2263
Regulator family:	FUR
Regulation mode:	repressor (activator)
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Regulog:	Fur - Shewanellaceae
Statistics of regulated genes:
- Genes	67
- Operons	39
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 505 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - FUR
By TF family - FUR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -59 Score: 5.6 Sequence: GACTGATAATAATTTTCATTT Locus tag: Sputcn32_1534 Name: null Funciton: Hypothetical protein
	Sputcn32_1534		Hypothetical protein
Position: -2 Score: 5.5 Sequence: AAATGATATCGATTCTCGTTT Locus tag: Sputcn32_1941 Name: null Funciton: Two component transcriptional regulator, Winged helix family
	Sputcn32_1941		Two component transcriptional regulator, Winged helix family
Position: -91 Score: 5.1 Sequence: AAATAACAATAACTATCATTA Locus tag: Sputcn32_0603 Name: Sden_3064 Funciton: TonB-dependent receptor
	Sputcn32_0603	Sden_3064	TonB-dependent receptor
Position: -219 Score: 6 Sequence: AAATGATAACGATTTGCATTT Locus tag: Sputcn32_2411 Name: pubA Funciton: Putrescine monooxygenase, PubA Locus tag: Sputcn32_2412 Name: pubB Funciton: N-hydroxyputrescine-succinyl CoA transferase, PubB Locus tag: Sputcn32_2413 Name: pubC Funciton: NTP-dependent putrebactin synthetase, PubC Locus tag: Sputcn32_2414 Name: putA Funciton: TonB-dependent ferric putrebactin siderophore receptor, PutA Locus tag: Sputcn32_2415 Name: putB Funciton: Ferric putrebactin reductase, PutB
	Sputcn32_2411	pubA	Putrescine monooxygenase, PubA
	Sputcn32_2412	pubB	N-hydroxyputrescine-succinyl CoA transferase, PubB
	Sputcn32_2413	pubC	NTP-dependent putrebactin synthetase, PubC
	Sputcn32_2414	putA	TonB-dependent ferric putrebactin siderophore receptor, PutA
	Sputcn32_2415	putB	Ferric putrebactin reductase, PutB
Position: -68 Score: 5.6 Sequence: AAATAAAAACACTTCTCATTT Locus tag: Sputcn32_3953 Name: null Funciton: TonB-dependent siderophore receptor
	Sputcn32_3953		TonB-dependent siderophore receptor
Position: -126 Score: 5.5 Sequence: AAATGAGAATGGTTTTTATAA Locus tag: Sputcn32_0948 Name: bfr2 Funciton: Bacterioferritin subunit 2 Locus tag: Sputcn32_0949 Name: bfr1 Funciton: Bacterioferritin subunit 1
	Sputcn32_0948	bfr2	Bacterioferritin subunit 2
	Sputcn32_0949	bfr1	Bacterioferritin subunit 1
Position: -64 Score: 5.7 Sequence: TAATGAGATTAATTCTTATTT Locus tag: Sputcn32_1479 Name: omcA3 Funciton: Surface localized undecaheme cytochrome c lipoprotein, UndA
	Sputcn32_1479	omcA3	Surface localized undecaheme cytochrome c lipoprotein, UndA
Position: -62 Score: 5.6 Sequence: AAATAATAACCATTCTCATTC Locus tag: Sputcn32_3191 Name: null Funciton: TonB-dependent outer membrane receptor Locus tag: Sputcn32_3192 Name: null Funciton: Periplasmic thioredoxin-family protein
	Sputcn32_3191		TonB-dependent outer membrane receptor
	Sputcn32_3192		Periplasmic thioredoxin-family protein
Position: -48 Score: 4.9 Sequence: AAATGCAAATAATAAGCAATT Locus tag: Sputcn32_2106 Name: null Funciton: Signalling protein with EAL domain
	Sputcn32_2106		Signalling protein with EAL domain
Position: -30 Score: 4.8 Sequence: GATTGCAAATGATTTTCAATG Locus tag: Sputcn32_1454 Name: null Funciton: Phosphomannomutase (EC 5.4.2.8) clustering with Aga operon
	Sputcn32_1454		Phosphomannomutase (EC 5.4.2.8) clustering with Aga operon
Position: -84 Score: 5.6 Sequence: AATTGAGAACTATTCTTATCT Locus tag: Sputcn32_1308 Name: null Funciton: TonB-dependent heme receptor
	Sputcn32_1308		TonB-dependent heme receptor
Position: -55 Score: 5.5 Sequence: AATTGAGAACCATTCTCAACA Locus tag: Sputcn32_2436 Name: null Funciton: Hypothetical inner membrane protein
	Sputcn32_2436		Hypothetical inner membrane protein
Position: -59 Score: 6 Sequence: TAATGAGAATTGTTATCATCT Locus tag: Sputcn32_3921 Name: null Funciton: Conserved hypothetical inner membrane protein
	Sputcn32_3921		Conserved hypothetical inner membrane protein
Position: -31 Score: 5.2 Sequence: AAATGATAATTATCATGATTA Locus tag: Sputcn32_0964 Name: exbB Funciton: TonB mediated energy transduction system, inner membrane component, ExbB Locus tag: Sputcn32_0963 Name: exbD Funciton: TonB mediated energy transduction system, inner membrane component, ExbD Locus tag: Sputcn32_0962 Name: hmuB Funciton: ABC hemin transporter, periplasmic ligand-binding subunit, HmuB Locus tag: Sputcn32_0961 Name: hmuC Funciton: ABC hemin transporter, inner membrane subunit, HmuC Locus tag: Sputcn32_0960 Name: hmuD Funciton: ABC hemin transporter, ATPase subunit, HmuD
	Sputcn32_0964	exbB	TonB mediated energy transduction system, inner membrane component, ExbB
	Sputcn32_0963	exbD	TonB mediated energy transduction system, inner membrane component, ExbD
	Sputcn32_0962	hmuB	ABC hemin transporter, periplasmic ligand-binding subunit, HmuB
	Sputcn32_0961	hmuC	ABC hemin transporter, inner membrane subunit, HmuC
	Sputcn32_0960	hmuD	ABC hemin transporter, ATPase subunit, HmuD
Position: -75 Score: 6.1 Sequence: AAATGGTAATCATTATCATTT Locus tag: Sputcn32_0965 Name: tonB Funciton: TonB mediated energy transduction system, energy transducer component, TonB
	Sputcn32_0965	tonB	TonB mediated energy transduction system, energy transducer component, TonB
Position: -77 Score: 5.3 Sequence: TAATGTTAATCATTATCATTC Locus tag: Sputcn32_3636 Name: null Funciton: TonB-dependent receptor
	Sputcn32_3636		TonB-dependent receptor
Position: -54 Score: 5.7 Sequence: AATTGATAACTATTCTCATTG Locus tag: Sputcn32_3671 Name: null Funciton: TonB-dependent receptor Locus tag: Sputcn32_3670 Name: null Funciton: Transcriptional regulator, TetR family Locus tag: Sputcn32_3669 Name: null Funciton: Ferric siderophore ABC transporter, permease protein Locus tag: Sputcn32_3668 Name: null Funciton: Ferric siderophore ABC transporter, permease protein Locus tag: Sputcn32_3667 Name: null Funciton: Ferric siderophore ABC transporter, ATP-binding protein Locus tag: Sputcn32_3666 Name: null Funciton: Putative iron transport protein
	Sputcn32_3671		TonB-dependent receptor
	Sputcn32_3670		Transcriptional regulator, TetR family
	Sputcn32_3669		Ferric siderophore ABC transporter, permease protein
	Sputcn32_3668		Ferric siderophore ABC transporter, permease protein
	Sputcn32_3667		Ferric siderophore ABC transporter, ATP-binding protein
	Sputcn32_3666		Putative iron transport protein
Position: -101 Score: 6 Sequence: AAATGAGAATTATTGTCATCT Locus tag: Sputcn32_1590 Name: null Funciton: TonB-dependent siderophore receptor
	Sputcn32_1590		TonB-dependent siderophore receptor
Position: -63 Score: 5.9 Sequence: TGTTGATAATAATTATCATTT Locus tag: Sputcn32_1997 Name: Sfri_2008 Funciton: Hypothetical protein
	Sputcn32_1997	Sfri_2008	Hypothetical protein
Position: -101 Score: 5.8 Sequence: TAACGATAATTATTATCATTT Locus tag: Sputcn32_3181 Name: Sbal_0657 Funciton: Hypothetical protein
	Sputcn32_3181	Sbal_0657	Hypothetical protein
Position: -131 Score: 5.7 Sequence: AAATGAAAATCATTTTTATCA Locus tag: Sputcn32_0132 Name: ftn Funciton: Ferritin, Ftn
	Sputcn32_0132	ftn	Ferritin, Ftn
Position: -85 Score: 5.2 Sequence: TAATACGAATTGTTATCAATA Position: -59 Score: 5.7 Sequence: TATTGATAATTGTTTTCAATT Locus tag: Sputcn32_1841 Name: null Funciton: TonB-dependent siderophore receptor
	Sputcn32_1841		TonB-dependent siderophore receptor
Position: -21 Score: 5.3 Sequence: AAATGAAAACTATTCGTAATA Locus tag: Sputcn32_3863 Name: null Funciton: TonB-dependent siderophore receptor
	Sputcn32_3863		TonB-dependent siderophore receptor
Position: -123 Score: 5.4 Sequence: AATTGAAAACTATTATCGTTA Locus tag: Sputcn32_1480 Name: feoA Funciton: Ferrous iron transport protein A Locus tag: Sputcn32_1481 Name: feoB Funciton: Ferrous iron transport protein B
	Sputcn32_1480	feoA	Ferrous iron transport protein A
	Sputcn32_1481	feoB	Ferrous iron transport protein B
Position: -184 Score: 5.2 Sequence: TATTGCGAATTGTTATCAATA Locus tag: Sputcn32_3397 Name: null Funciton: Iron-regulated inner membrane protein Locus tag: Sputcn32_3396 Name: null Funciton: Iron-regulated inner membrane protein Locus tag: Sputcn32_3395 Name: null Funciton: Iron-regulated membrane protein
	Sputcn32_3397		Iron-regulated inner membrane protein
	Sputcn32_3396		Iron-regulated inner membrane protein
	Sputcn32_3395		Iron-regulated membrane protein
Position: -178 Score: 6.1 Sequence: AAATGATAATGATTACCATTT Locus tag: Sputcn32_0966 Name: hmuA Funciton: TonB-dependent haem/haemoglobin receptor, HmuA Locus tag: Sputcn32_0967 Name: huvX Funciton: Putative heme iron utilization protein Locus tag: Sputcn32_0968 Name: null Funciton: Pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein
	Sputcn32_0966	hmuA	TonB-dependent haem/haemoglobin receptor, HmuA
	Sputcn32_0967	huvX	Putative heme iron utilization protein
	Sputcn32_0968		Pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein
Position: -93 Score: 5.2 Sequence: GTTTGATAATAAATATCATTT Locus tag: Sputcn32_2850 Name: null Funciton: Inner membrane protein with PepSY TM helix Locus tag: Sputcn32_2849 Name: null Funciton: Putative exported protein Locus tag: Sputcn32_2848 Name: null Funciton: putative exported protein
	Sputcn32_2850		Inner membrane protein with PepSY TM helix
	Sputcn32_2849		Putative exported protein
	Sputcn32_2848		putative exported protein
Position: -48 Score: 5.1 Sequence: CATTAAGAATAATTATCATTC Locus tag: Sputcn32_1826 Name: null Funciton: TonB-dependent receptor
	Sputcn32_1826		TonB-dependent receptor
Position: -90 Score: 5.7 Sequence: AATTGAAAACAATTATCAATA Position: -64 Score: 5.2 Sequence: TATTGATAACAATTCGTATTA Locus tag: Sputcn32_1842 Name: COG3182 Funciton: PepSY-associated TM helix domain-containing protein Locus tag: Sputcn32_1843 Name: Sfri_2547 Funciton: Conserved hypothetical protein
	Sputcn32_1842	COG3182	PepSY-associated TM helix domain-containing protein
	Sputcn32_1843	Sfri_2547	Conserved hypothetical protein
Position: -74 Score: 5.8 Sequence: AAGTGATAACTATTATCATTA Locus tag: Sputcn32_3227 Name: fbpA Funciton: ABC iron(III) transporter, periplasmic ligand-binding subunit, FbpA Locus tag: Sputcn32_3226 Name: fbpB Funciton: ABC iron(III) transporter, inner membrane subunit, FbpB Locus tag: Sputcn32_3225 Name: fbpC Funciton: ABC iron(III) transporter, ATPase subunit, FbpC
	Sputcn32_3227	fbpA	ABC iron(III) transporter, periplasmic ligand-binding subunit, FbpA
	Sputcn32_3226	fbpB	ABC iron(III) transporter, inner membrane subunit, FbpB
	Sputcn32_3225	fbpC	ABC iron(III) transporter, ATPase subunit, FbpC
Position: -52 Score: 5.9 Sequence: TATTGAAAATTGTTCTCATTT Locus tag: Sputcn32_3503 Name: null Funciton: TonB-dependent receptor
	Sputcn32_3503		TonB-dependent receptor
Position: -101 Score: 5.6 Sequence: AAATGATAATCCTTCTCAGTT Locus tag: Sputcn32_0330 Name: viuA Funciton: TonB-dependent receptor
	Sputcn32_0330	viuA	TonB-dependent receptor
Position: -196 Score: 5.5 Sequence: AAATGATATCGTTTATCATTT Locus tag: Sputcn32_2727 Name: null Funciton: Conserved hypothetical protein Locus tag: Sputcn32_2728 Name: null Funciton: Iron-regulated membrane protein Locus tag: Sputcn32_2729 Name: null Funciton: Conserved hypothetical inner membrane protein
	Sputcn32_2727		Conserved hypothetical protein
	Sputcn32_2728		Iron-regulated membrane protein
	Sputcn32_2729		Conserved hypothetical inner membrane protein
Position: -60 Score: 4.6 Sequence: TTATGATAATGGATATTGTTT Locus tag: Sputcn32_2703 Name: null Funciton: Cytochrome B561 Locus tag: Sputcn32_2702 Name: yceI Funciton: Protein yceI precursor
	Sputcn32_2703		Cytochrome B561
	Sputcn32_2702	yceI	Protein yceI precursor
Position: -97 Score: 5.6 Sequence: TAACGAAAATCGTTATCATTT Locus tag: Sputcn32_0401 Name: SO4423.1 Funciton: TonB-dependent ferric achromobactin receptor
	Sputcn32_0401	SO4423.1	TonB-dependent ferric achromobactin receptor
Position: -54 Score: 5.3 Sequence: ATTTGATAAGCGTTTTCATTT Locus tag: Sputcn32_3295 Name: bfd Funciton: Bacterioferritin-associated ferredoxin
	Sputcn32_3295	bfd	Bacterioferritin-associated ferredoxin
Position: -49 Score: 4.7 Sequence: AAATACAAATCATTACTATTC Locus tag: Sputcn32_1237 Name: null Funciton: TonB-dependent receptor
	Sputcn32_1237		TonB-dependent receptor
Position: -91 Score: 5.1 Sequence: AAATAACAATAACTATCATTA Locus tag: Sputcn32_0603 Name: null Funciton: TonB-dependent siderophore receptor
	Sputcn32_0603		TonB-dependent siderophore receptor
Position: -40 Score: 6 Sequence: AGATGATAATGATTATCAATT Locus tag: Sputcn32_2679 Name: null Funciton: Hypothetical inner membrane protein
	Sputcn32_2679		Hypothetical inner membrane protein

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Fur in Shewanella putrefaciens CN-32

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --