Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NarP in Shewanella woodyi ATCC 51908

Properties
Regulator type: Transcription factor
TF locus tag: Swoo_0970
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Regulog: NarP - Shewanellaceae
Statistics of regulated genes:
- Genes 19
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 249 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -157
Score: 4.4
Sequence: TACCAAGTTAGAGGTA
Locus tag: Swoo_2682
Name: napE2
Funciton: Periplasmic nitrate reductase component NapE
Locus tag: Swoo_2681
Name: napD2
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: Swoo_2680
Name: napA2
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Swoo_2679
Name: napB2
Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: Swoo_2678
Name: napC2
Funciton: Cytochrome c-type protein NapC
Swoo_2682
napE2
Periplasmic nitrate reductase component NapE
Swoo_2681
napD2
Periplasmic nitrate reductase component NapD
Swoo_2680
napA2
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Swoo_2679
napB2
Nitrate reductase cytochrome c550-type subunit
Swoo_2678
napC2
Cytochrome c-type protein NapC
Position: -161
Score: 5.1
Sequence: TACCTCTTTAGTAGTA
Locus tag: Swoo_4517
Name: SO3141
Funciton: Nonaheme cytochrome c lipoprotein
Swoo_4517
SO3141
Nonaheme cytochrome c lipoprotein
Position: -100
Score: 5
Sequence: TACCTCATAAGGGGTA
Locus tag: Swoo_0972
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2)
Swoo_0972
nrfA
Nitrite reductase, cytochrome c(552) (EC 1.7.2.2)
Position: -133
Score: 4.1
Sequence: TATCTATAAGTGGGTA
Locus tag: Swoo_3207
Name: ompW
Funciton: Outer membrane protein W precursor
Swoo_3207
ompW
Outer membrane protein W precursor
Position: -124
Score: 5
Sequence: TACCCCTTACTAGGTA
Locus tag: Swoo_4109
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: Swoo_4110
Name: napA
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Swoo_4111
Name: napB
Funciton: Nitrate reductase cytochrome c550-type subunit
Swoo_4109
napD
Periplasmic nitrate reductase component NapD
Swoo_4110
napA
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Swoo_4111
napB
Nitrate reductase cytochrome c550-type subunit
Position: -164
Score: 5
Sequence: TACCACTTTATAGGTA
Position: -150
Score: 4.8
Sequence: TACCACTTAATTAGTA
Locus tag: Swoo_3303
Name: Shew_2655
Funciton: Conserved hypothetical protein
Swoo_3303
Shew_2655
Conserved hypothetical protein
Position: -218
Score: 5
Sequence: TACCCCTTTATAAATA
Locus tag: Swoo_3125
Name: mtrC
Funciton: Surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Swoo_3126
Name: mtrA
Funciton: Periplasmic decaheme cytochrome c, MtrA
Locus tag: Swoo_3127
Name: mtrB
Funciton: Outer membrane protein, MtrB
Swoo_3125
mtrC
Surface localized decaheme cytochrome c lipoprotein, MtrC
Swoo_3126
mtrA
Periplasmic decaheme cytochrome c, MtrA
Swoo_3127
mtrB
Outer membrane protein, MtrB
Position: -107
Score: 4.8
Sequence: TAACTCTAAAGTGGTA
Locus tag: Swoo_4806
Name: SO4520
Funciton: Coproporphyrinogen III oxidase, oxygen-independent
Swoo_4806
SO4520
Coproporphyrinogen III oxidase, oxygen-independent
Position: -160
Score: 5.2
Sequence: TACCCCTTATGAGGTA
Locus tag: Swoo_0971
Name: narQ
Funciton: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-)
Locus tag: Swoo_0970
Name: narP
Funciton: Nitrate/nitrite response regulator protein NarP, LuxR family
Swoo_0971
narQ
Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-)
Swoo_0970
narP
Nitrate/nitrite response regulator protein NarP, LuxR family
Position: -209
Score: 5.1
Sequence: TACCCCTAAAGAAATA
Locus tag: Swoo_3124
Name: omcA
Funciton: Surface localized decaheme cytochrome c lipoprotein, OmcA
Swoo_3124
omcA
Surface localized decaheme cytochrome c lipoprotein, OmcA
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