Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NarP in Shewanella pealeana ATCC 700345

Properties
Regulator type: Transcription factor
TF locus tag: Spea_0829
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Regulog: NarP - Shewanellaceae
Statistics of regulated genes:
- Genes 21
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 249 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -133
Score: 3.9
Sequence: TATCTCGAAGTGGGTA
Locus tag: Spea_2787
Name: ompW
Funciton: Outer membrane protein W precursor
Spea_2787
ompW
Outer membrane protein W precursor
Position: -109
Score: 4.6
Sequence: TATCTCTTTAGTAGTA
Locus tag: Spea_3600
Name: Spea_3600
Funciton: Predicted deca-heme c-type cytochrome
Spea_3600
Spea_3600
Predicted deca-heme c-type cytochrome
Position: -155
Score: 4.4
Sequence: TACTCATTAAGATATA
Locus tag: Spea_1227
Name: nnrS2
Funciton: NnrS protein involved in response to NO
Locus tag: Spea_1228
Name: nrfA2
Funciton: Nitrite reductase, cytochrome c(552)
Spea_1227
nnrS2
NnrS protein involved in response to NO
Spea_1228
nrfA2
Nitrite reductase, cytochrome c(552)
Position: -158
Score: 4.6
Sequence: TACCTCCAAAGTAATA
Locus tag: Spea_3939
Name: Sfri_3897
Funciton: Flavocytochrome c, flavin subunit
Locus tag: Spea_3938
Name: Sfri_3896
Funciton: Flavocytochrome c, heme submit
Spea_3939
Sfri_3897
Flavocytochrome c, flavin subunit
Spea_3938
Sfri_3896
Flavocytochrome c, heme submit
Position: -101
Score: 4.5
Sequence: TACCTCAAAGTGAGTA
Locus tag: Spea_0722
Name: fccA
Funciton: Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
Spea_0722
fccA
Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
Position: -118
Score: 4.9
Sequence: TACCCCTTGTGAGGTA
Locus tag: Spea_0624
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: Spea_0623
Name: napA
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Spea_0622
Name: napG
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapG
Locus tag: Spea_0621
Name: napH
Funciton: Periplasmic nitrate reductase, polyferredoxin NapH
Locus tag: Spea_0620
Name: napB
Funciton: Nitrate reductase cytochrome c550-type subunit
Spea_0624
napD
Periplasmic nitrate reductase component NapD
Spea_0623
napA
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Spea_0622
napG
Periplasmic nitrate reductase, ferredoxin-type protein NapG
Spea_0621
napH
Periplasmic nitrate reductase, polyferredoxin NapH
Spea_0620
napB
Nitrate reductase cytochrome c550-type subunit
Position: -165
Score: 4.5
Sequence: TACCTACTTGTAGGTA
Position: -151
Score: 4.4
Sequence: TATCCCTAAATTAGTA
Locus tag: Spea_3233
Name: Shew_2655
Funciton: Conserved hypothetical protein
Spea_3233
Shew_2655
Conserved hypothetical protein
Position: -101
Score: 4.9
Sequence: TACCTCATAGGAGGTA
Locus tag: Spea_0831
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2)
Spea_0831
nrfA
Nitrite reductase, cytochrome c(552) (EC 1.7.2.2)
Position: -157
Score: 5
Sequence: TACCTCCTATGAGGTA
Locus tag: Spea_0830
Name: narQ
Funciton: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-)
Locus tag: Spea_0829
Name: narP
Funciton: Nitrate/nitrite response regulator protein NarP, LuxR family
Spea_0830
narQ
Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-)
Spea_0829
narP
Nitrate/nitrite response regulator protein NarP, LuxR family
Position: -195
Score: 5.2
Sequence: TACCTCTTTAGAAATA
Locus tag: Spea_2698
Name: mtrC
Funciton: Surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Spea_2699
Name: mtrA
Funciton: Periplasmic decaheme cytochrome c, MtrA
Locus tag: Spea_2700
Name: mtrB
Funciton: Outer membrane protein, MtrB
Spea_2698
mtrC
Surface localized decaheme cytochrome c lipoprotein, MtrC
Spea_2699
mtrA
Periplasmic decaheme cytochrome c, MtrA
Spea_2700
mtrB
Outer membrane protein, MtrB
Position: -260
Score: 4.6
Sequence: CACCTCTTTATAGATA
Locus tag: Spea_0589
Name: omp35
Funciton: Outer membrane porin, predicted
Spea_0589
omp35
Outer membrane porin, predicted
Position: -184
Score: 5.1
Sequence: TACCCCTAAAGAAATA
Locus tag: Spea_2697
Name: omcA
Funciton: Surface localized decaheme cytochrome c lipoprotein, OmcA
Spea_2697
omcA
Surface localized decaheme cytochrome c lipoprotein, OmcA
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