Regulon of NarP in Shewanella sp W3-18-1

Properties
Regulator type:	Transcription factor
TF locus tag:	Sputw3181_3488
Regulator family:	LuxR
Regulation mode:	activator (repressor)
Biological process:	Nitrate and nitrite respiration
Effector:	Nitrite; Nitrate
Regulog:	NarP - Shewanellaceae
Statistics of regulated genes:
- Genes	35
- Operons	16
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 249 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - NarP
By TF family - LuxR
By effector - Nitrite
By effector - Nitrate
By pathway - Nitrate and nitrite respiration

Regulated operons
	Locus Tag	Name	Function
Position: -145 Score: 4.4 Sequence: TACCGATTTGGAGGTA Locus tag: Sputw3181_2107 Name: napE2 Funciton: Periplasmic nitrate reductase component NapE Locus tag: Sputw3181_2106 Name: napD2 Funciton: Periplasmic nitrate reductase component NapD Locus tag: Sputw3181_2105 Name: napA2 Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4) Locus tag: Sputw3181_2104 Name: napB2 Funciton: Nitrate reductase cytochrome c550-type subunit Locus tag: Sputw3181_2103 Name: napC2 Funciton: Cytochrome c-type protein NapC
	Sputw3181_2107	napE2	Periplasmic nitrate reductase component NapE
	Sputw3181_2106	napD2	Periplasmic nitrate reductase component NapD
	Sputw3181_2105	napA2	Periplasmic nitrate reductase precursor (EC 1.7.99.4)
	Sputw3181_2104	napB2	Nitrate reductase cytochrome c550-type subunit
	Sputw3181_2103	napC2	Cytochrome c-type protein NapC
Position: -162 Score: 5.2 Sequence: TACCTCTTAGGAGGTA Locus tag: Sputw3181_3487 Name: narQ Funciton: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) Locus tag: Sputw3181_3488 Name: narP Funciton: Nitrate/nitrite response regulator protein NarP, LuxR family
	Sputw3181_3487	narQ	Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-)
	Sputw3181_3488	narP	Nitrate/nitrite response regulator protein NarP, LuxR family
Position: -77 Score: 4.5 Sequence: TACCTCTTTTTAGGTG Locus tag: Sputw3181_1576 Name: SO3058 Funciton: Flavocytochrome c, flavin subunit Locus tag: Sputw3181_1577 Name: SO3057 Funciton: Phenylalanine/histidine ammonia-lyase family protein Locus tag: Sputw3181_1578 Name: SO3056 Funciton: Flavocytochrome c, heme submit
	Sputw3181_1576	SO3058	Flavocytochrome c, flavin subunit
	Sputw3181_1577	SO3057	Phenylalanine/histidine ammonia-lyase family protein
	Sputw3181_1578	SO3056	Flavocytochrome c, heme submit
Position: -242 Score: 4.2 Sequence: TAACCCTTATTAGGTG Position: -132 Score: 4.6 Sequence: TACCTATAAGTGGGTA Locus tag: Sputw3181_2709 Name: ompW Funciton: Outer membrane protein W precursor
	Sputw3181_2709	ompW	Outer membrane protein W precursor
Position: -256 Score: 5.1 Sequence: TACCTCTTAAGTAGTA Locus tag: Sputw3181_3394 Name: omp35 Funciton: Outer membrane porin, predicted
	Sputw3181_3394	omp35	Outer membrane porin, predicted
Position: -116 Score: 4.9 Sequence: TACCTCTTGTGAGGTA Locus tag: Sputw3181_0796 Name: napD Funciton: Periplasmic nitrate reductase component NapD Locus tag: Sputw3181_0795 Name: napA Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4) Locus tag: Sputw3181_0794 Name: napG Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapG Locus tag: Sputw3181_0793 Name: napH Funciton: Periplasmic nitrate reductase, polyferredoxin NapH Locus tag: Sputw3181_0792 Name: napB Funciton: Nitrate reductase cytochrome c550-type subunit
	Sputw3181_0796	napD	Periplasmic nitrate reductase component NapD
	Sputw3181_0795	napA	Periplasmic nitrate reductase precursor (EC 1.7.99.4)
	Sputw3181_0794	napG	Periplasmic nitrate reductase, ferredoxin-type protein NapG
	Sputw3181_0793	napH	Periplasmic nitrate reductase, polyferredoxin NapH
	Sputw3181_0792	napB	Nitrate reductase cytochrome c550-type subunit
Position: -42 Score: 4.7 Sequence: TAACCCTTATTAAGTA Locus tag: Sputw3181_3267 Name: fccA Funciton: Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
	Sputw3181_3267	fccA	Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
Position: -180 Score: 5.1 Sequence: TACCCCTAAAGAAATA Locus tag: Sputw3181_2622 Name: omcA Funciton: Surface localized decaheme cytochrome c lipoprotein, OmcA
	Sputw3181_2622	omcA	Surface localized decaheme cytochrome c lipoprotein, OmcA
Position: -95 Score: 5.2 Sequence: TACCTCCTAAGAGGTA Locus tag: Sputw3181_3486 Name: nrfA Funciton: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2)
	Sputw3181_3486	nrfA	Nitrite reductase, cytochrome c(552) (EC 1.7.2.2)
Position: -104 Score: 4.2 Sequence: CACCTAAAAAGAGGTA Locus tag: Sputw3181_1575 Name: SO3059 Funciton: Predicted transcriptional activator
	Sputw3181_1575	SO3059	Predicted transcriptional activator
Position: -77 Score: 4.9 Sequence: TACCACTTTATAAGTA Locus tag: Sputw3181_2721 Name: mtrF Funciton: Decaheme cytochrome c MtrF
	Sputw3181_2721	mtrF	Decaheme cytochrome c MtrF
Position: -134 Score: 4.8 Sequence: TACCTGTTTAGGGGTA Locus tag: Sputw3181_0243 Name: moaA Funciton: Molybdenum cofactor biosynthesis protein MoaA Locus tag: Sputw3181_0244 Name: moaC Funciton: Molybdenum cofactor biosynthesis protein MoaC Locus tag: Sputw3181_0245 Name: moaD Funciton: Molybdenum cofactor biosynthesis protein MoaD Locus tag: Sputw3181_0246 Name: moaE Funciton: Molybdenum cofactor biosynthesis protein MoaE Locus tag: Sputw3181_0247 Name: modA Funciton: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) Locus tag: Sputw3181_0248 Name: modB Funciton: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) Locus tag: Sputw3181_0249 Name: modC Funciton: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1)
	Sputw3181_0243	moaA	Molybdenum cofactor biosynthesis protein MoaA
	Sputw3181_0244	moaC	Molybdenum cofactor biosynthesis protein MoaC
	Sputw3181_0245	moaD	Molybdenum cofactor biosynthesis protein MoaD
	Sputw3181_0246	moaE	Molybdenum cofactor biosynthesis protein MoaE
	Sputw3181_0247	modA	Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1)
	Sputw3181_0248	modB	Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1)
	Sputw3181_0249	modC	Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1)
Position: -217 Score: 3.7 Sequence: TAACTCGACAGAGTTA Locus tag: Sputw3181_3522 Name: crp Funciton: Cyclic AMP receptor protein, transcriptional regulator Crp
	Sputw3181_3522	crp	Cyclic AMP receptor protein, transcriptional regulator Crp
Position: -219 Score: 4.4 Sequence: TATCTCTAAAGTAATA Locus tag: Sputw3181_1501 Name: SO3141 Funciton: Nonaheme cytochrome c lipoprotein
	Sputw3181_1501	SO3141	Nonaheme cytochrome c lipoprotein
Position: -137 Score: 4.6 Sequence: TACTCCCTAAGGAATA Locus tag: Sputw3181_3715 Name: dnrN Funciton: Nitric oxide-dependent regulator DnrN
	Sputw3181_3715	dnrN	Nitric oxide-dependent regulator DnrN
Position: -204 Score: 5.2 Sequence: TACCTCTTTAGAAATA Locus tag: Sputw3181_2623 Name: mtrC Funciton: Surface localized decaheme cytochrome c lipoprotein, MtrC Locus tag: Sputw3181_2624 Name: mtrA Funciton: Periplasmic decaheme cytochrome c, MtrA Locus tag: Sputw3181_2625 Name: mtrB Funciton: Outer membrane protein, MtrB
	Sputw3181_2623	mtrC	Surface localized decaheme cytochrome c lipoprotein, MtrC
	Sputw3181_2624	mtrA	Periplasmic decaheme cytochrome c, MtrA
	Sputw3181_2625	mtrB	Outer membrane protein, MtrB

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of NarP in Shewanella sp W3-18-1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --