Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NarP in Shewanella putrefaciens CN-32

Properties
Regulator type: Transcription factor
TF locus tag: Sputcn32_0683
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Regulog: NarP - Shewanellaceae
Statistics of regulated genes:
- Genes 35
- Operons 16
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 249 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -145
Score: 4.4
Sequence: TACCGATTTGGAGGTA
Locus tag: Sputcn32_1901
Name: napE2
Funciton: Periplasmic nitrate reductase component NapE
Locus tag: Sputcn32_1902
Name: napD2
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: Sputcn32_1903
Name: napA2
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Sputcn32_1904
Name: napB2
Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: Sputcn32_1905
Name: napC2
Funciton: Cytochrome c-type protein NapC
Sputcn32_1901
napE2
Periplasmic nitrate reductase component NapE
Sputcn32_1902
napD2
Periplasmic nitrate reductase component NapD
Sputcn32_1903
napA2
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Sputcn32_1904
napB2
Nitrate reductase cytochrome c550-type subunit
Sputcn32_1905
napC2
Cytochrome c-type protein NapC
Position: -219
Score: 4.9
Sequence: TACCTCTAAAGTAATA
Locus tag: Sputcn32_2507
Name: SO3141
Funciton: Nonaheme cytochrome c lipoprotein
Sputcn32_2507
SO3141
Nonaheme cytochrome c lipoprotein
Position: -162
Score: 5.2
Sequence: TACCTCTTAGGAGGTA
Locus tag: Sputcn32_0684
Name: narQ
Funciton: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-)
Locus tag: Sputcn32_0683
Name: narP
Funciton: Nitrate/nitrite response regulator protein NarP, LuxR family
Sputcn32_0684
narQ
Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-)
Sputcn32_0683
narP
Nitrate/nitrite response regulator protein NarP, LuxR family
Position: -242
Score: 4.1
Sequence: TAACCCTTACTAGGTG
Position: -132
Score: 4.6
Sequence: TACCTATAAGTGGGTA
Locus tag: Sputcn32_1392
Name: ompW
Funciton: Outer membrane protein W precursor
Sputcn32_1392
ompW
Outer membrane protein W precursor
Position: -77
Score: 4.5
Sequence: TACCTCTTTTTAGGTG
Locus tag: Sputcn32_2432
Name: SO3058
Funciton: Flavocytochrome c, flavin subunit
Locus tag: Sputcn32_2431
Name: SO3057
Funciton: Phenylalanine/histidine ammonia-lyase family protein
Locus tag: Sputcn32_2430
Name: SO3056
Funciton: Flavocytochrome c, heme submit
Sputcn32_2432
SO3058
Flavocytochrome c, flavin subunit
Sputcn32_2431
SO3057
Phenylalanine/histidine ammonia-lyase family protein
Sputcn32_2430
SO3056
Flavocytochrome c, heme submit
Position: -256
Score: 5.1
Sequence: TACCTCTTAAGTAGTA
Locus tag: Sputcn32_0781
Name: omp35
Funciton: Outer membrane porin, predicted
Sputcn32_0781
omp35
Outer membrane porin, predicted
Position: -42
Score: 4.7
Sequence: TAACCCTTATTAAGTA
Locus tag: Sputcn32_0905
Name: fccA
Funciton: Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
Sputcn32_0905
fccA
Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
Position: -116
Score: 4.9
Sequence: TACCTCTTGTGAGGTA
Locus tag: Sputcn32_3147
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: Sputcn32_3148
Name: napA
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Sputcn32_3149
Name: napG
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapG
Locus tag: Sputcn32_3150
Name: napH
Funciton: Periplasmic nitrate reductase, polyferredoxin NapH
Locus tag: Sputcn32_3151
Name: napB
Funciton: Nitrate reductase cytochrome c550-type subunit
Sputcn32_3147
napD
Periplasmic nitrate reductase component NapD
Sputcn32_3148
napA
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Sputcn32_3149
napG
Periplasmic nitrate reductase, ferredoxin-type protein NapG
Sputcn32_3150
napH
Periplasmic nitrate reductase, polyferredoxin NapH
Sputcn32_3151
napB
Nitrate reductase cytochrome c550-type subunit
Position: -180
Score: 5.1
Sequence: TACCCCTAAAGAAATA
Locus tag: Sputcn32_1479
Name: omcA
Funciton: Surface localized decaheme cytochrome c lipoprotein, OmcA
Sputcn32_1479
omcA
Surface localized decaheme cytochrome c lipoprotein, OmcA
Position: -104
Score: 4.2
Sequence: CACCTAAAAAGAGGTA
Locus tag: Sputcn32_2433
Name: SO3059
Funciton: Predicted transcriptional activator
Sputcn32_2433
SO3059
Predicted transcriptional activator
Position: -77
Score: 4.9
Sequence: TACCACTTTATAAGTA
Locus tag: Sputcn32_1380
Name: mtrF
Funciton: Decaheme cytochrome c MtrF
Sputcn32_1380
mtrF
Decaheme cytochrome c MtrF
Position: -134
Score: 4.8
Sequence: TACCTGTTTAGGGGTA
Locus tag: Sputcn32_0389
Name: moaA
Funciton: Molybdenum cofactor biosynthesis protein MoaA
Locus tag: Sputcn32_0390
Name: moaC
Funciton: Molybdenum cofactor biosynthesis protein MoaC
Locus tag: Sputcn32_0391
Name: moaD
Funciton: Molybdenum cofactor biosynthesis protein MoaD
Locus tag: Sputcn32_0392
Name: moaE
Funciton: Molybdenum cofactor biosynthesis protein MoaE
Locus tag: Sputcn32_0393
Name: modA
Funciton: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1)
Locus tag: Sputcn32_0394
Name: modB
Funciton: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1)
Locus tag: Sputcn32_0395
Name: modC
Funciton: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1)
Sputcn32_0389
moaA
Molybdenum cofactor biosynthesis protein MoaA
Sputcn32_0390
moaC
Molybdenum cofactor biosynthesis protein MoaC
Sputcn32_0391
moaD
Molybdenum cofactor biosynthesis protein MoaD
Sputcn32_0392
moaE
Molybdenum cofactor biosynthesis protein MoaE
Sputcn32_0393
modA
Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1)
Sputcn32_0394
modB
Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1)
Sputcn32_0395
modC
Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1)
Position: -217
Score: 3.7
Sequence: TAACTCGACAGAGTTA
Locus tag: Sputcn32_0652
Name: crp
Funciton: Cyclic AMP receptor protein, transcriptional regulator Crp
Sputcn32_0652
crp
Cyclic AMP receptor protein, transcriptional regulator Crp
Position: -95
Score: 5.2
Sequence: TACCTCCTAAGAGGTA
Locus tag: Sputcn32_0685
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2)
Sputcn32_0685
nrfA
Nitrite reductase, cytochrome c(552) (EC 1.7.2.2)
Position: -137
Score: 4.6
Sequence: TACTCCCTAAGGAATA
Locus tag: Sputcn32_3576
Name: dnrN
Funciton: Nitric oxide-dependent regulator DnrN
Sputcn32_3576
dnrN
Nitric oxide-dependent regulator DnrN
Position: -204
Score: 5.2
Sequence: TACCTCTTTAGAAATA
Locus tag: Sputcn32_1478
Name: mtrC
Funciton: Surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Sputcn32_1477
Name: mtrA
Funciton: Periplasmic decaheme cytochrome c, MtrA
Locus tag: Sputcn32_1476
Name: mtrB
Funciton: Outer membrane protein, MtrB
Sputcn32_1478
mtrC
Surface localized decaheme cytochrome c lipoprotein, MtrC
Sputcn32_1477
mtrA
Periplasmic decaheme cytochrome c, MtrA
Sputcn32_1476
mtrB
Outer membrane protein, MtrB
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