Regulon of Cobalamin in Vibrio salmonicida LFI1238
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Regulog: | Cobalamin - Vibrionales |
| Under regulation: | |
| - Genes | 6 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Vibrionales
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -277
Score: 75.2 Sequence: CTACTATTTCGGCCA...
Locus tag: VSAL_I2886
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: VSAL_I2885
Name: COG2102 Funciton: Hypothetical amidotransferase related to B12 salvage
Locus tag: VSAL_I2884
Name: COG0796 Funciton: putative glutamate racemase (EC 5.1.1.3) |
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btuB
|
Outer membrane vitamin B12 receptor BtuB
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COG2102
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Hypothetical amidotransferase related to B12 salvage
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COG0796
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putative glutamate racemase (EC 5.1.1.3)
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Position: -127
Score: 29 Sequence: GAATACGGTGAAACT...
Locus tag: VSAL_II1074
Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: VSAL_II1075
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: VSAL_II1076
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD |
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btuF
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Vitamin B12 ABC transporter, B12-binding component BtuF
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btuC
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Vitamin B12 ABC transporter, permease component BtuC
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btuD
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Vitamin B12 ABC transporter, ATPase component BtuD
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |