Regulon of Cobalamin in Vibrio splendidus LGP32
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Regulog: | Cobalamin - Vibrionales |
| Under regulation: | |
| - Genes | 14 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Vibrionales
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -223
Score: 83 Sequence: GGGAATCAGGTGTAA...
Locus tag: VS_2661
Name: cbiD Funciton: Cobalt-precorrin-6 synthase, anaerobic
Locus tag: VS_2662
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: VS_2663
Name: cbiET Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: VS_2664
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: VS_2665
Name: cbiG Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: VS_2666
Name: cbiK Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Locus tag: VS_2667
Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase
Locus tag: VS_2668
Name: cbiF Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: VS_2669
Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: VS_2670
Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: VS_2671
Name: cbiA Funciton: Cobyrinic acid A,C-diamide synthase |
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cbiD
|
Cobalt-precorrin-6 synthase, anaerobic
|
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cbiC
|
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
|
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cbiET
|
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
|
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cbiL
|
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
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cbiG
|
Cobalamin biosynthesis protein CbiG
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cbiK
|
Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
|
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cbiH
|
Cobalt-precorrin-3b C17-methyltransferase
|
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cbiF
|
Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
|
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cbiB
|
Adenosylcobinamide-phosphate synthase
|
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cobD
|
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
|
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cbiA
|
Cobyrinic acid A,C-diamide synthase
|
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Position: -244
Score: 100.5 Sequence: ATACTATTTCCGGCA...
Locus tag: VS_2998
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: VS_2997
Name: COG2102 Funciton: Hypothetical amidotransferase related to B12 salvage
Locus tag: VS_2996
Name: COG0796 Funciton: putative glutamate racemase (EC 5.1.1.3) |
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btuB
|
Outer membrane vitamin B12 receptor BtuB
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COG2102
|
Hypothetical amidotransferase related to B12 salvage
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COG0796
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putative glutamate racemase (EC 5.1.1.3)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |