Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Cobalamin in Vibrio splendidus LGP32

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Regulog: Cobalamin - Vibrionales
Under regulation:
- Genes 14
- Operons 2
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -223
Score: 83
Sequence: GGGAATCAGGTGTAA...
Locus tag: VS_2661
Name: cbiD
Funciton: Cobalt-precorrin-6 synthase, anaerobic
Locus tag: VS_2662
Name: cbiC
Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: VS_2663
Name: cbiET
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: VS_2664
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: VS_2665
Name: cbiG
Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: VS_2666
Name: cbiK
Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Locus tag: VS_2667
Name: cbiH
Funciton: Cobalt-precorrin-3b C17-methyltransferase
Locus tag: VS_2668
Name: cbiF
Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: VS_2669
Name: cbiB
Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: VS_2670
Name: cobD
Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: VS_2671
Name: cbiA
Funciton: Cobyrinic acid A,C-diamide synthase
cbiD
Cobalt-precorrin-6 synthase, anaerobic
cbiC
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
cbiET
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
cbiL
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
cbiG
Cobalamin biosynthesis protein CbiG
cbiK
Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
cbiH
Cobalt-precorrin-3b C17-methyltransferase
cbiF
Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
cbiB
Adenosylcobinamide-phosphate synthase
cobD
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
cbiA
Cobyrinic acid A,C-diamide synthase

Position: -244
Score: 100.5
Sequence: ATACTATTTCCGGCA...
Locus tag: VS_2998
Name: btuB
Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: VS_2997
Name: COG2102
Funciton: Hypothetical amidotransferase related to B12 salvage
Locus tag: VS_2996
Name: COG0796
Funciton: putative glutamate racemase (EC 5.1.1.3)
btuB
Outer membrane vitamin B12 receptor BtuB
COG2102
Hypothetical amidotransferase related to B12 salvage
COG0796
putative glutamate racemase (EC 5.1.1.3)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD