Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of TPP in Photobacterium profundum SS9

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Vibrionales
Under regulation:
- Genes 13
- Operons 3
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -177
Score: 71.4
Sequence: AGCTTGTTAGTCGGG...
Locus tag: PBPRB0688
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: PBPRB0687
Name: thiZ
Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: PBPRB0686
Name: thiX
Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: PBPRB0685
Name: thiY
Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: PBPRB0684
Name: tenA
Funciton: Thiaminase II (EC 3.5.99.2)
thiD
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiZ
Hydroxymethylpyrimidine ABC transporter, ATPase component
thiX
Hydroxymethylpyrimidine ABC transporter, transmembrane component
thiY
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
tenA
Thiaminase II (EC 3.5.99.2)

Position: -234
Score: 81.8
Sequence: GAAACTTGTCGGAGT...
Locus tag: PBPRA0106
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
Locus tag: PBPRA0107
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: PBPRA0108
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: PBPRA0109
Name: thiG
Funciton: Thiazole biosynthesis protein ThiG
Locus tag: PBPRA0110
Name: thiH
Funciton: Thiazole biosynthesis protein ThiH
thiC
Thiamin biosynthesis protein ThiC
thiE
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiF
Sulfur carrier protein adenylyltransferase ThiF
thiG
Thiazole biosynthesis protein ThiG
thiH
Thiazole biosynthesis protein ThiH

Position: -289
Score: 64
Sequence: ACCGTTCTCATTGGG...
Locus tag: PBPRA0413
Name: thiB
Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: PBPRA0412
Name: thiP
Funciton: Thiamin ABC transporter, transmembrane component
Locus tag: PBPRA0411
Name: thiQ
Funciton: Thiamin ABC transporter, ATPase component
thiB
Thiamin ABC transporter, substrate-binding component
thiP
Thiamin ABC transporter, transmembrane component
thiQ
Thiamin ABC transporter, ATPase component
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