Regulon of TPP in Photobacterium profundum SS9

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Vibrionales
Under regulation:
- Genes	13
- Operons	3

Member of regulog collections

By taxonomy - Vibrionales
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -177 Score: 71.4 Sequence: AGCTTGTTAGTCGGG... Locus tag: PBPRB0688 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: PBPRB0687 Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component Locus tag: PBPRB0686 Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component Locus tag: PBPRB0685 Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component Locus tag: PBPRB0684 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
	PBPRB0688	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	PBPRB0687	thiZ	Hydroxymethylpyrimidine ABC transporter, ATPase component
	PBPRB0686	thiX	Hydroxymethylpyrimidine ABC transporter, transmembrane component
	PBPRB0685	thiY	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
	PBPRB0684	tenA	Thiaminase II (EC 3.5.99.2)
Position: -234 Score: 81.8 Sequence: GAAACTTGTCGGAGT... Locus tag: PBPRA0106 Name: thiC Funciton: Thiamin biosynthesis protein ThiC Locus tag: PBPRA0107 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: PBPRA0108 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: PBPRA0109 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: PBPRA0110 Name: thiH Funciton: Thiazole biosynthesis protein ThiH
	PBPRA0106	thiC	Thiamin biosynthesis protein ThiC
	PBPRA0107	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	PBPRA0108	thiF	Sulfur carrier protein adenylyltransferase ThiF
	PBPRA0109	thiG	Thiazole biosynthesis protein ThiG
	PBPRA0110	thiH	Thiazole biosynthesis protein ThiH
Position: -289 Score: 64 Sequence: ACCGTTCTCATTGGG... Locus tag: PBPRA0413 Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component Locus tag: PBPRA0412 Name: thiP Funciton: Thiamin ABC transporter, transmembrane component Locus tag: PBPRA0411 Name: thiQ Funciton: Thiamin ABC transporter, ATPase component
	PBPRA0413	thiB	Thiamin ABC transporter, substrate-binding component
	PBPRA0412	thiP	Thiamin ABC transporter, transmembrane component
	PBPRA0411	thiQ	Thiamin ABC transporter, ATPase component

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD