Regulon of TPP in Photobacterium profundum SS9
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Vibrionales |
| Under regulation: | |
| - Genes | 13 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Vibrionales
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -177
Score: 71.4 Sequence: AGCTTGTTAGTCGGG...
Locus tag: PBPRB0688
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: PBPRB0687
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: PBPRB0686
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: PBPRB0685
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: PBPRB0684
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) |
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thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
|
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thiZ
|
Hydroxymethylpyrimidine ABC transporter, ATPase component
|
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thiX
|
Hydroxymethylpyrimidine ABC transporter, transmembrane component
|
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thiY
|
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
|
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tenA
|
Thiaminase II (EC 3.5.99.2)
|
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Position: -234
Score: 81.8 Sequence: GAAACTTGTCGGAGT...
Locus tag: PBPRA0106
Name: thiC Funciton: Thiamin biosynthesis protein ThiC
Locus tag: PBPRA0107
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: PBPRA0108
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: PBPRA0109
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: PBPRA0110
Name: thiH Funciton: Thiazole biosynthesis protein ThiH |
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thiC
|
Thiamin biosynthesis protein ThiC
|
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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thiF
|
Sulfur carrier protein adenylyltransferase ThiF
|
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thiG
|
Thiazole biosynthesis protein ThiG
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thiH
|
Thiazole biosynthesis protein ThiH
|
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Position: -289
Score: 64 Sequence: ACCGTTCTCATTGGG...
Locus tag: PBPRA0413
Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: PBPRA0412
Name: thiP Funciton: Thiamin ABC transporter, transmembrane component
Locus tag: PBPRA0411
Name: thiQ Funciton: Thiamin ABC transporter, ATPase component |
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thiB
|
Thiamin ABC transporter, substrate-binding component
|
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thiP
|
Thiamin ABC transporter, transmembrane component
|
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thiQ
|
Thiamin ABC transporter, ATPase component
|
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |