Regulon of TPP in Vibrio salmonicida LFI1238
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Vibrionales |
| Under regulation: | |
| - Genes | 16 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Vibrionales
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -197
Score: 72.9 Sequence: GGCATTAGTCGGGGA...
Locus tag: VSAL_II0486
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: VSAL_II0487
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: VSAL_II0488
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: VSAL_II0489
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: VSAL_II0490
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: VSAL_II0491
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: VSAL_II0492
Name: thiE2 Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
|
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thiZ
|
Hydroxymethylpyrimidine ABC transporter, ATPase component
|
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thiX
|
Hydroxymethylpyrimidine ABC transporter, transmembrane component
|
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thiY
|
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
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tenA
|
Thiaminase II (EC 3.5.99.2)
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thiM
|
Hydroxyethylthiazole kinase (EC 2.7.1.50)
|
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thiE2
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
|
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Position: -271
Score: 77.7 Sequence: GAAACTTGTCGGAGT...
Locus tag: VSAL_I2983
Name: thiC Funciton: Thiamin biosynthesis protein ThiC
Locus tag: VSAL_I2984
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: VSAL_I2985
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: VSAL_I2986
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: VSAL_I2987
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: VSAL_I2988
Name: thiH Funciton: Thiazole biosynthesis protein ThiH |
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thiC
|
Thiamin biosynthesis protein ThiC
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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thiF
|
Sulfur carrier protein adenylyltransferase ThiF
|
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thiS
|
Sulfur carrier protein ThiS
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thiG
|
Thiazole biosynthesis protein ThiG
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thiH
|
Thiazole biosynthesis protein ThiH
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Position: -164
Score: 59.4 Sequence: GCCTCTCATCGGGGA...
Locus tag: VSAL_I0349
Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: VSAL_I0350
Name: thiP Funciton: Thiamin ABC transporter, transmembrane component
Locus tag: VSAL_I0351
Name: thiQ Funciton: Thiamin ABC transporter, ATPase component |
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thiB
|
Thiamin ABC transporter, substrate-binding component
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thiP
|
Thiamin ABC transporter, transmembrane component
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thiQ
|
Thiamin ABC transporter, ATPase component
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |