Regulon of TPP in Vibrio salmonicida LFI1238

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Vibrionales
Under regulation:
- Genes	16
- Operons	3

Member of regulog collections

By taxonomy - Vibrionales
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -197 Score: 72.9 Sequence: GGCATTAGTCGGGGA... Locus tag: VSAL_II0486 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: VSAL_II0487 Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component Locus tag: VSAL_II0488 Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component Locus tag: VSAL_II0489 Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component Locus tag: VSAL_II0490 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) Locus tag: VSAL_II0491 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: VSAL_II0492 Name: thiE2 Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	VSAL_II0486	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	VSAL_II0487	thiZ	Hydroxymethylpyrimidine ABC transporter, ATPase component
	VSAL_II0488	thiX	Hydroxymethylpyrimidine ABC transporter, transmembrane component
	VSAL_II0489	thiY	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
	VSAL_II0490	tenA	Thiaminase II (EC 3.5.99.2)
	VSAL_II0491	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	VSAL_II0492	thiE2	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -271 Score: 77.7 Sequence: GAAACTTGTCGGAGT... Locus tag: VSAL_I2983 Name: thiC Funciton: Thiamin biosynthesis protein ThiC Locus tag: VSAL_I2984 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: VSAL_I2985 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: VSAL_I2986 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: VSAL_I2987 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: VSAL_I2988 Name: thiH Funciton: Thiazole biosynthesis protein ThiH
	VSAL_I2983	thiC	Thiamin biosynthesis protein ThiC
	VSAL_I2984	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	VSAL_I2985	thiF	Sulfur carrier protein adenylyltransferase ThiF
	VSAL_I2986	thiS	Sulfur carrier protein ThiS
	VSAL_I2987	thiG	Thiazole biosynthesis protein ThiG
	VSAL_I2988	thiH	Thiazole biosynthesis protein ThiH
Position: -164 Score: 59.4 Sequence: GCCTCTCATCGGGGA... Locus tag: VSAL_I0349 Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component Locus tag: VSAL_I0350 Name: thiP Funciton: Thiamin ABC transporter, transmembrane component Locus tag: VSAL_I0351 Name: thiQ Funciton: Thiamin ABC transporter, ATPase component
	VSAL_I0349	thiB	Thiamin ABC transporter, substrate-binding component
	VSAL_I0350	thiP	Thiamin ABC transporter, transmembrane component
	VSAL_I0351	thiQ	Thiamin ABC transporter, ATPase component

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD