Regulon of TPP in Vibrio fischeri ES114

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Vibrionales
Under regulation:
- Genes	16
- Operons	3

Member of regulog collections

By taxonomy - Vibrionales
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -301 Score: 77.8 Sequence: GAAACTTGTCGGAGT... Locus tag: VF_0032 Name: thiC Funciton: Thiamin biosynthesis protein ThiC Locus tag: VF_0033 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: VF_0034 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: VF_2576 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: VF_0035 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: VF_0036 Name: thiH Funciton: Thiazole biosynthesis protein ThiH
	VF_0032	thiC	Thiamin biosynthesis protein ThiC
	VF_0033	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	VF_0034	thiF	Sulfur carrier protein adenylyltransferase ThiF
	VF_2576	thiS	Sulfur carrier protein ThiS
	VF_0035	thiG	Thiazole biosynthesis protein ThiG
	VF_0036	thiH	Thiazole biosynthesis protein ThiH
Position: -199 Score: 73 Sequence: GCCATTAGTCGGGGA... Locus tag: VF_A0316 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: VF_A0317 Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component Locus tag: VF_A0318 Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component Locus tag: VF_A0319 Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component Locus tag: VF_A0320 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) Locus tag: VF_A0321 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: VF_A0322 Name: thiE2 Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	VF_A0316	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	VF_A0317	thiZ	Hydroxymethylpyrimidine ABC transporter, ATPase component
	VF_A0318	thiX	Hydroxymethylpyrimidine ABC transporter, transmembrane component
	VF_A0319	thiY	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
	VF_A0320	tenA	Thiaminase II (EC 3.5.99.2)
	VF_A0321	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	VF_A0322	thiE2	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -165 Score: 60.6 Sequence: ACTTCTCATCGGGGA... Locus tag: VF_0267 Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component Locus tag: VF_0268 Name: thiP Funciton: Thiamin ABC transporter, transmembrane component Locus tag: VF_0269 Name: thiQ Funciton: Thiamin ABC transporter, ATPase component
	VF_0267	thiB	Thiamin ABC transporter, substrate-binding component
	VF_0268	thiP	Thiamin ABC transporter, transmembrane component
	VF_0269	thiQ	Thiamin ABC transporter, ATPase component

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD