Regulon of TPP in Vibrio splendidus LGP32

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Vibrionales
Under regulation:
- Genes	15
- Operons	3

Member of regulog collections

By taxonomy - Vibrionales
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -229 Score: 80.3 Sequence: ATCGAACTTGTCGGA... Locus tag: VS_3098 Name: thiC Funciton: Thiamin biosynthesis protein ThiC Locus tag: VS_3097 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: VS_3096 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: VS_3095 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: VS_3094 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: VS_3093 Name: thiH Funciton: Thiazole biosynthesis protein ThiH
	VS_3098	thiC	Thiamin biosynthesis protein ThiC
	VS_3097	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	VS_3096	thiF	Sulfur carrier protein adenylyltransferase ThiF
	VS_3095	thiS	Sulfur carrier protein ThiS
	VS_3094	thiG	Thiazole biosynthesis protein ThiG
	VS_3093	thiH	Thiazole biosynthesis protein ThiH
Position: -209 Score: 68.9 Sequence: CTATCAATAGTCGGG... Locus tag: VS_II1090 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: VS_II1089 Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component Locus tag: VS_II1088 Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component Locus tag: VS_II1087 Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component Locus tag: VS_II1086 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) Locus tag: VS_II1085 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
	VS_II1090	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	VS_II1089	thiZ	Hydroxymethylpyrimidine ABC transporter, ATPase component
	VS_II1088	thiX	Hydroxymethylpyrimidine ABC transporter, transmembrane component
	VS_II1087	thiY	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
	VS_II1086	tenA	Thiaminase II (EC 3.5.99.2)
	VS_II1085	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
Position: -174 Score: 57.9 Sequence: TGAACACTCATCGGG... Locus tag: VS_2767 Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component Locus tag: VS_2766 Name: thiP Funciton: Thiamin ABC transporter, transmembrane component Locus tag: VS_2765 Name: thiQ Funciton: Thiamin ABC transporter, ATPase component
	VS_2767	thiB	Thiamin ABC transporter, substrate-binding component
	VS_2766	thiP	Thiamin ABC transporter, transmembrane component
	VS_2765	thiQ	Thiamin ABC transporter, ATPase component

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD