Regulon of TPP in Vibrio harveyi ATCC BAA-1116

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Vibrionales
Under regulation:
- Genes	16
- Operons	3

Member of regulog collections

By taxonomy - Vibrionales
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -218 Score: 71.9 Sequence: CGAAATAGTCGGGGG... Locus tag: VIBHAR_06838 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: VIBHAR_06839 Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component Locus tag: VIBHAR_06840 Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component Locus tag: VIBHAR_06841 Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component Locus tag: VIBHAR_06842 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) Locus tag: VIBHAR_06843 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: VIBHAR_06844 Name: thiE2 Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	VIBHAR_06838	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	VIBHAR_06839	thiZ	Hydroxymethylpyrimidine ABC transporter, ATPase component
	VIBHAR_06840	thiX	Hydroxymethylpyrimidine ABC transporter, transmembrane component
	VIBHAR_06841	thiY	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
	VIBHAR_06842	tenA	Thiaminase II (EC 3.5.99.2)
	VIBHAR_06843	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	VIBHAR_06844	thiE2	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -217 Score: 49.1 Sequence: CCAACTCATCGGGGA... Locus tag: VIBHAR_00788 Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component Locus tag: VIBHAR_00789 Name: thiP Funciton: Thiamin ABC transporter, transmembrane component Locus tag: VIBHAR_00790 Name: thiQ Funciton: Thiamin ABC transporter, ATPase component
	VIBHAR_00788	thiB	Thiamin ABC transporter, substrate-binding component
	VIBHAR_00789	thiP	Thiamin ABC transporter, transmembrane component
	VIBHAR_00790	thiQ	Thiamin ABC transporter, ATPase component
Position: -265 Score: 69.7 Sequence: ATTTCACTTGTCGGA... Locus tag: VIBHAR_00366 Name: thiC Funciton: Thiamin biosynthesis protein ThiC Locus tag: VIBHAR_00365 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: VIBHAR_00364 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: VIBHAR_00363 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: VIBHAR_00362 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: VIBHAR_00361 Name: thiH Funciton: Thiazole biosynthesis protein ThiH
	VIBHAR_00366	thiC	Thiamin biosynthesis protein ThiC
	VIBHAR_00365	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	VIBHAR_00364	thiF	Sulfur carrier protein adenylyltransferase ThiF
	VIBHAR_00363	thiS	Sulfur carrier protein ThiS
	VIBHAR_00362	thiG	Thiazole biosynthesis protein ThiG
	VIBHAR_00361	thiH	Thiazole biosynthesis protein ThiH

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD