Regulon of TPP in Vibrio cholerae O1 biovar eltor str. N16961

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Vibrionales
Under regulation:
- Genes	10
- Operons	3

Member of regulog collections

By taxonomy - Vibrionales
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -128 Score: 31 Sequence: TGCGATGTTCGCGGT... Locus tag: VC2539 Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component Locus tag: VC2538 Name: thiP Funciton: Thiamin ABC transporter, transmembrane component Locus tag: VC2537 Name: thiQ Funciton: Thiamin ABC transporter, ATPase component
	VC2539	thiB	Thiamin ABC transporter, substrate-binding component
	VC2538	thiP	Thiamin ABC transporter, transmembrane component
	VC2537	thiQ	Thiamin ABC transporter, ATPase component
Position: -198 Score: 76.2 Sequence: TCCACTTGTCGGAGT... Locus tag: VC0061 Name: thiC Funciton: Thiamin biosynthesis protein ThiC Locus tag: VC0062 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: VC0063 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: VC0064 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: VC0065 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: VC0066 Name: thiH Funciton: Thiazole biosynthesis protein ThiH
	VC0061	thiC	Thiamin biosynthesis protein ThiC
	VC0062	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	VC0063	thiF	Sulfur carrier protein adenylyltransferase ThiF
	VC0064	thiS	Sulfur carrier protein ThiS
	VC0065	thiG	Thiazole biosynthesis protein ThiG
	VC0066	thiH	Thiazole biosynthesis protein ThiH
Position: -307 Score: 54.4 Sequence: TCCTGTAGTCGGGGA... Locus tag: VC1296 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	VC1296	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD