Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Cobalamin in Deinococcus geothermalis DSM 11300

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Regulog: Cobalamin - Deinococcus-Thermus
Under regulation:
- Genes 24
- Operons 2
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -259
Score: 35
Sequence: CCGGCTTCTGCTATC...
Locus tag: Dgeo_2363
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Dgeo_2362
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Dgeo_2361
Name: cbiE
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)
Locus tag: Dgeo_2360
Name: cbiXC
Funciton: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Dgeo_2359
Name: cbiD
Funciton: Cobalt-precorrin-6 synthase, anaerobic
Locus tag: Dgeo_2358
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Dgeo_2357
Name: cbiF
Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: Dgeo_2356
Name: cbiG
Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: Dgeo_2355
Name: cbiHJ
Funciton: Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-6x reductase (EC 1.3.1.54)
Locus tag: Dgeo_2354
Name: cobW
Funciton: Cobalamin synthesis protein
Locus tag: Dgeo_2353
Name: hoxN
Funciton: HoxN/HupN/NixA family cobalt transporter
Locus tag: Dgeo_2352
Name: cobN
Funciton: Cobaltochelatase, CobN subunit
Locus tag: Dgeo_2351
Name: null
Funciton: Methyltransferase type 11
Locus tag: Dgeo_2350
Name: chlID
Funciton: Cobalt chelatase, ChlI subunit / Cobalt chelatase, ChlD subunit
Locus tag: Dgeo_2349
Name: cbiA
Funciton: Cobyrinic acid a,c-diamide synthase
Locus tag: Dgeo_2348
Name: cbiB
Funciton: Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
Locus tag: Dgeo_2875
Name: cobD
Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: Dgeo_2874
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: Dgeo_2873
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Dgeo_2872
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Dgeo_2363
btuF
Vitamin B12 ABC transporter, B12-binding component BtuF
Dgeo_2362
btuR
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Dgeo_2361
cbiE
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)
Dgeo_2360
cbiXC
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Dgeo_2359
cbiD
Cobalt-precorrin-6 synthase, anaerobic
Dgeo_2358
cbiL
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Dgeo_2357
cbiF
Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Dgeo_2356
cbiG
Cobalamin biosynthesis protein CbiG
Dgeo_2355
cbiHJ
Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-6x reductase (EC 1.3.1.54)
Dgeo_2354
cobW
Cobalamin synthesis protein
Dgeo_2353
hoxN
HoxN/HupN/NixA family cobalt transporter
Dgeo_2352
cobN
Cobaltochelatase, CobN subunit
Dgeo_2351
Methyltransferase type 11
Dgeo_2350
chlID
Cobalt chelatase, ChlI subunit / Cobalt chelatase, ChlD subunit
Dgeo_2349
cbiA
Cobyrinic acid a,c-diamide synthase
Dgeo_2348
cbiB
Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
Dgeo_2875
cobD
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Dgeo_2874
cbiP
Cobyric acid synthase
Dgeo_2873
cobU
Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Dgeo_2872
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Position: -244
Score: 21.6
Sequence: GGGAAAGACCGGTGA...
Locus tag: Dgeo_0025
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Dgeo_0024
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component
Locus tag: Dgeo_0023
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATP-binding component
Locus tag: Dgeo_0022
Name: COG3411
Funciton: Thioredoxin domain protein
Dgeo_0025
btuF
Vitamin B12 ABC transporter, B12-binding component BtuF
Dgeo_0024
btuC
Vitamin B12 ABC transporter, permease component
Dgeo_0023
btuD
Vitamin B12 ABC transporter, ATP-binding component
Dgeo_0022
COG3411
Thioredoxin domain protein
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