Regulon of Cobalamin in Deinococcus radiodurans R1
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Regulog: | Cobalamin - Deinococcus-Thermus |
| Under regulation: | |
| - Genes | 10 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Deinococcus-Thermus
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -100
Score: 13.8 Sequence: GGGGAAGCCCGGTGA...
Locus tag: DRB0007
Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: DRB0008
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: DRB0009
Name: cbiA Funciton: Cobyrinic acid a,c-diamide synthase
Locus tag: DRB0010
Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
Locus tag: DRB0011
Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: DRB0012
Name: cbiP Funciton: Cobyric acid synthase |
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btuF
|
Vitamin B12 ABC transporter, B12-binding component BtuF
|
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btuR
|
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
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cbiA
|
Cobyrinic acid a,c-diamide synthase
|
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cbiB
|
Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
|
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cobD
|
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
|
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cbiP
|
Cobyric acid synthase
|
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Position: -84
Score: 17.6 Sequence: GGGAAAGTCCGGTTT...
Locus tag: DR2588
Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: DR2589
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component
Locus tag: DR2590
Name: btuD Funciton: Vitamin B12 ABC transporter, ATP-binding component
Locus tag: DR2591
Name: COG3411 Funciton: Thioredoxin domain protein |
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btuF
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Vitamin B12 ABC transporter, B12-binding component BtuF
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btuC
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Vitamin B12 ABC transporter, permease component
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btuD
|
Vitamin B12 ABC transporter, ATP-binding component
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COG3411
|
Thioredoxin domain protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |