Regulon of TPP in Deinococcus geothermalis DSM 11300
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Deinococcus-Thermus |
| Under regulation: | |
| - Genes | 8 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Deinococcus-Thermus
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -269
Score: 60 Sequence: GGGCAGTCACCAGGG...
Locus tag: Dgeo_1924
Name: thiC Funciton: Thiamin biosynthesis protein ThiC
Locus tag: Dgeo_1923
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Dgeo_1922
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Dgeo_1921
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: Dgeo_1920
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: Dgeo_1919
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
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thiC
|
Thiamin biosynthesis protein ThiC
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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thiS
|
Sulfur carrier protein ThiS
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thiG
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Thiazole biosynthesis protein ThiG
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thiO
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Glycine oxidase ThiO (EC 1.4.3.19)
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thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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Position: -170
Score: 42.2 Sequence: CGCGTCACCGGGGGT...
Locus tag: Dgeo_1933
Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: Dgeo_1934
Name: thiP Funciton: Thiamin ABC transporter, permease protein |
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thiB
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Thiamin ABC transporter, substrate-binding component
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thiP
|
Thiamin ABC transporter, permease protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |