Regulon of PaaR in Kordia algicida OT-1

Properties
Regulator type:	Transcription factor
TF locus tag:	KAOT1_20482
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Phenylacetic acid degradation
Effector:	Phenylacetyl-CoA
Regulog:	PaaR - Flavobacteria
Statistics of regulated genes:
- Genes	11
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 8 sites [see more]

Member of regulog collections

By trascription factor - PaaR
By TF family - TetR
By effector - Phenylacetyl-CoA
By pathway - Phenylacetic acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -44 Score: 6.3 Sequence: CAAACTAACAATTGTTAG Locus tag: KAOT1_20492 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-. Locus tag: KAOT1_20497 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: KAOT1_20502 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: KAOT1_20507 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: KAOT1_20512 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: KAOT1_20517 Name: paaG Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: KAOT1_20522 Name: null Funciton: hypothetical protein Locus tag: KAOT1_20527 Name: paaH Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) Locus tag: KAOT1_20532 Name: MED134_10421 Funciton: hypothetical protein Locus tag: KAOT1_20537 Name: paaY Funciton: thioesterase superfamily protein Locus tag: KAOT1_20542 Name: paaJ Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
	KAOT1_20492	paaE	Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.
	KAOT1_20497	paaA	Phenylacetate-CoA oxygenase, PaaA subunit
	KAOT1_20502	paaB	Phenylacetate-CoA oxygenase, PaaB subunit
	KAOT1_20507	paaC	Phenylacetate-CoA oxygenase, PaaC subunit
	KAOT1_20512	paaD	Phenylacetate-CoA oxygenase, PaaD subunit
	KAOT1_20517	paaG	Enoyl-CoA hydratase (EC 4.2.1.17)
	KAOT1_20522		hypothetical protein
	KAOT1_20527	paaH	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
	KAOT1_20532	MED134_10421	hypothetical protein
	KAOT1_20537	paaY	thioesterase superfamily protein
	KAOT1_20542	paaJ	Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD