Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PaaR in Flavobacteriales bacterium ALC-1

Properties
Regulator type: Transcription factor
TF locus tag: FBALC1_14262
Regulator family: TetR
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Regulog: PaaR - Flavobacteria
Statistics of regulated genes:
- Genes 16
- Operons 1
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -39
Score: 6.2
Sequence: CAAACTAACAAGTGTTAG
Locus tag: FBALC1_14257
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.
Locus tag: FBALC1_14252
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: FBALC1_14247
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: FBALC1_14242
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: FBALC1_14237
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: FBALC1_14232
Name: null
Funciton: hypothetical protein
Locus tag: FBALC1_14227
Name: paaG
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: FBALC1_14222
Name: null
Funciton: serine racemase
Locus tag: FBALC1_14217
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: FBALC1_14212
Name: paaY
Funciton: thioesterase superfamily protein
Locus tag: FBALC1_14207
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: FBALC1_14202
Name: null
Funciton: Probable short-chain dehydrogenase
Locus tag: FBALC1_14197
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Locus tag: FBALC1_14192
Name: null
Funciton: hypothetical protein
Locus tag: FBALC1_14187
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: FBALC1_14182
Name: paaY2
Funciton: Phenylacetic acid degradation protein PaaY
paaE
Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.
paaA
Phenylacetate-CoA oxygenase, PaaA subunit
paaB
Phenylacetate-CoA oxygenase, PaaB subunit
paaC
Phenylacetate-CoA oxygenase, PaaC subunit
paaD
Phenylacetate-CoA oxygenase, PaaD subunit
hypothetical protein
paaG
Enoyl-CoA hydratase (EC 4.2.1.17)
serine racemase
paaH
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
paaY
thioesterase superfamily protein
paaJ
Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Probable short-chain dehydrogenase
paaZ
Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
hypothetical protein
paaF
Enoyl-CoA hydratase (EC 4.2.1.17)
paaY2
Phenylacetic acid degradation protein PaaY
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