Regulon of PaaR in Flavobacteriales bacterium ALC-1

Properties
Regulator type:	Transcription factor
TF locus tag:	FBALC1_14262
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Phenylacetic acid degradation
Effector:	Phenylacetyl-CoA
Regulog:	PaaR - Flavobacteria
Statistics of regulated genes:
- Genes	16
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 8 sites [see more]

Member of regulog collections

By trascription factor - PaaR
By TF family - TetR
By effector - Phenylacetyl-CoA
By pathway - Phenylacetic acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -39 Score: 6.2 Sequence: CAAACTAACAAGTGTTAG Locus tag: FBALC1_14257 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-. Locus tag: FBALC1_14252 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: FBALC1_14247 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: FBALC1_14242 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: FBALC1_14237 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: FBALC1_14232 Name: null Funciton: hypothetical protein Locus tag: FBALC1_14227 Name: paaG Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: FBALC1_14222 Name: null Funciton: serine racemase Locus tag: FBALC1_14217 Name: paaH Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) Locus tag: FBALC1_14212 Name: paaY Funciton: thioesterase superfamily protein Locus tag: FBALC1_14207 Name: paaJ Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) Locus tag: FBALC1_14202 Name: null Funciton: Probable short-chain dehydrogenase Locus tag: FBALC1_14197 Name: paaZ Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ Locus tag: FBALC1_14192 Name: null Funciton: hypothetical protein Locus tag: FBALC1_14187 Name: paaF Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: FBALC1_14182 Name: paaY2 Funciton: Phenylacetic acid degradation protein PaaY
	FBALC1_14257	paaE	Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.
	FBALC1_14252	paaA	Phenylacetate-CoA oxygenase, PaaA subunit
	FBALC1_14247	paaB	Phenylacetate-CoA oxygenase, PaaB subunit
	FBALC1_14242	paaC	Phenylacetate-CoA oxygenase, PaaC subunit
	FBALC1_14237	paaD	Phenylacetate-CoA oxygenase, PaaD subunit
	FBALC1_14232		hypothetical protein
	FBALC1_14227	paaG	Enoyl-CoA hydratase (EC 4.2.1.17)
	FBALC1_14222		serine racemase
	FBALC1_14217	paaH	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
	FBALC1_14212	paaY	thioesterase superfamily protein
	FBALC1_14207	paaJ	Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
	FBALC1_14202		Probable short-chain dehydrogenase
	FBALC1_14197	paaZ	Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
	FBALC1_14192		hypothetical protein
	FBALC1_14187	paaF	Enoyl-CoA hydratase (EC 4.2.1.17)
	FBALC1_14182	paaY2	Phenylacetic acid degradation protein PaaY

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD