Regulon of PaaR in Croceibacter atlanticus HTCC2559
| Regulator type: | Transcription factor |
| TF locus tag: | CA2559_05345 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Phenylacetic acid degradation |
| Effector: | Phenylacetyl-CoA |
| Regulog: | PaaR - Flavobacteria |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 2 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - PaaR
- By TF family - TetR
- By effector - Phenylacetyl-CoA
- By pathway - Phenylacetic acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -65
Score: 6.2 Sequence: CTAACTAACGTTTGTTAG
Locus tag: CA2559_05340
Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.
Locus tag: CA2559_05335
Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: CA2559_05330
Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: CA2559_05325
Name: null Funciton: hypothetical protein
Locus tag: CA2559_05320
Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: CA2559_05315
Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: CA2559_05310
Name: paaG Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: CA2559_05300
Name: paaH Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) |
|||
|
paaE
|
Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.
|
||
|
paaA
|
Phenylacetate-CoA oxygenase, PaaA subunit
|
||
|
paaB
|
Phenylacetate-CoA oxygenase, PaaB subunit
|
||
|
hypothetical protein
|
|||
|
paaC
|
Phenylacetate-CoA oxygenase, PaaC subunit
|
||
|
paaD
|
Phenylacetate-CoA oxygenase, PaaD subunit
|
||
|
paaG
|
Enoyl-CoA hydratase (EC 4.2.1.17)
|
||
|
paaH
|
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
|
||
|
Position: -38
Score: 6.3 Sequence: CTAACTAACAAGTGTTAG
Locus tag: CA2559_05345
Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family |
|||
|
paaR
|
Transcriptional regulator of phenylacetic acid degradation, TetR family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |