Regulon of PaaR in Croceibacter atlanticus HTCC2559

Properties
Regulator type:	Transcription factor
TF locus tag:	CA2559_05345
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Phenylacetic acid degradation
Effector:	Phenylacetyl-CoA
Regulog:	PaaR - Flavobacteria
Statistics of regulated genes:
- Genes	9
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 8 sites [see more]

Member of regulog collections

By trascription factor - PaaR
By TF family - TetR
By effector - Phenylacetyl-CoA
By pathway - Phenylacetic acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -65 Score: 6.2 Sequence: CTAACTAACGTTTGTTAG Locus tag: CA2559_05340 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-. Locus tag: CA2559_05335 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: CA2559_05330 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: CA2559_05325 Name: null Funciton: hypothetical protein Locus tag: CA2559_05320 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: CA2559_05315 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: CA2559_05310 Name: paaG Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: CA2559_05300 Name: paaH Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
	CA2559_05340	paaE	Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.
	CA2559_05335	paaA	Phenylacetate-CoA oxygenase, PaaA subunit
	CA2559_05330	paaB	Phenylacetate-CoA oxygenase, PaaB subunit
	CA2559_05325		hypothetical protein
	CA2559_05320	paaC	Phenylacetate-CoA oxygenase, PaaC subunit
	CA2559_05315	paaD	Phenylacetate-CoA oxygenase, PaaD subunit
	CA2559_05310	paaG	Enoyl-CoA hydratase (EC 4.2.1.17)
	CA2559_05300	paaH	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Position: -38 Score: 6.3 Sequence: CTAACTAACAAGTGTTAG Locus tag: CA2559_05345 Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
	CA2559_05345	paaR	Transcriptional regulator of phenylacetic acid degradation, TetR family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD