Regulon of PaaR in Cellulophaga sp. MED134
| Regulator type: | Transcription factor |
| TF locus tag: | MED134_11661 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Phenylacetic acid degradation |
| Effector: | Phenylacetyl-CoA |
| Regulog: | PaaR - Flavobacteria |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - PaaR
- By TF family - TetR
- By effector - Phenylacetyl-CoA
- By pathway - Phenylacetic acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -42
Score: 5.5 Sequence: TTAACTAACAATCGTTAG
Locus tag: MED134_11666
Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.
Locus tag: MED134_11671
Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: MED134_11676
Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: MED134_11681
Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: MED134_11686
Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: MED134_11691
Name: paaG Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: MED134_11696
Name: paaH Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: MED134_11701
Name: paaY Funciton: thioesterase superfamily protein
Locus tag: MED134_11706
Name: paaJ Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: MED134_11711
Name: null Funciton: Probable short-chain dehydrogenase
Locus tag: MED134_11716
Name: paaZ Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Locus tag: MED134_11721
Name: paaF Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) |
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paaE
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Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.
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paaA
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Phenylacetate-CoA oxygenase, PaaA subunit
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paaB
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Phenylacetate-CoA oxygenase, PaaB subunit
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paaC
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Phenylacetate-CoA oxygenase, PaaC subunit
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paaD
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Phenylacetate-CoA oxygenase, PaaD subunit
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paaG
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Enoyl-CoA hydratase (EC 4.2.1.17)
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paaH
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3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
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paaY
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thioesterase superfamily protein
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paaJ
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Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
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Probable short-chain dehydrogenase
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paaZ
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Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
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paaF
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Enoyl-CoA hydratase (EC 4.2.1.17)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |