Regulon of PaaR in Silicibacter pomeroyi DSS-3

Properties
Regulator type:	Transcription factor
TF locus tag:	SPO0743
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Phenylacetic acid degradation
Effector:	Phenylacetyl-CoA
Regulog:	PaaR - Rhodobacterales
Statistics of regulated genes:
- Genes	7
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 13 sites [see more]

Member of regulog collections

By trascription factor - PaaR
By taxonomy - Rhodobacterales
By TF family - TetR
By effector - Phenylacetyl-CoA
By pathway - Phenylacetic acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -61 Score: 6.4 Sequence: ATTGACCAACCGTTCGGTTTAT Locus tag: SPO0740 Name: paaF Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: SPO0741 Name: paaY Funciton: thioesterase superfamily protein Locus tag: SPO0742 Name: paaK Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30) Locus tag: SPO0743 Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
	SPO0740	paaF	Enoyl-CoA hydratase (EC 4.2.1.17)
	SPO0741	paaY	thioesterase superfamily protein
	SPO0742	paaK	Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
	SPO0743	paaR	Transcriptional regulator of phenylacetic acid degradation, TetR family
Position: -90 Score: 5.4 Sequence: ATTGACCGACCGTTCGGTCGCG Locus tag: SPO0735 Name: paaZ Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ Locus tag: SPO0734 Name: paaX Funciton: Phenylacetic acid degradation operon negative regulatory protein paaX
	SPO0735	paaZ	Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
	SPO0734	paaX	Phenylacetic acid degradation operon negative regulatory protein paaX
Position: -63 Score: 6.4 Sequence: ATAAACCGAACGGTTGGTCAAT Locus tag: SPO0739 Name: paaG Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	SPO0739	paaG	Enoyl-CoA hydratase (EC 4.2.1.17)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD