Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Caldicellulosiruptor saccharolyticus DSM 8903

Properties
Regulator type: Transcription factor
TF locus tag: Csac_1220
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Thermoanaerobacterales
Statistics of regulated genes:
- Genes 22
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 42 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -38
Score: 5.2
Sequence: ATGTTAAATTTCTAACAA
Locus tag: Csac_1860
Name: hydC
Funciton: NAD-reducing Fe-hydrogenase, subunit HydC (EC 1.12.7.2)
Locus tag: Csac_1861
Name: CLOLEP_03890
Funciton: histidine kinase
Locus tag: Csac_1862
Name: hydD
Funciton: NAD-reducing Fe-hydrogenase, ferredoxin subunit HydD (EC 1.12.7.2)
Locus tag: Csac_1863
Name: hydB
Funciton: NAD-reducing Fe-hydrogenase, subunit HydB (EC 1.12.7.2)
Locus tag: Csac_1864
Name: hydA
Funciton: NAD-reducing Fe-hydrogenase, subunit HydA (EC 1.12.7.2)
Csac_1860
hydC
NAD-reducing Fe-hydrogenase, subunit HydC (EC 1.12.7.2)
Csac_1861
CLOLEP_03890
histidine kinase
Csac_1862
hydD
NAD-reducing Fe-hydrogenase, ferredoxin subunit HydD (EC 1.12.7.2)
Csac_1863
hydB
NAD-reducing Fe-hydrogenase, subunit HydB (EC 1.12.7.2)
Csac_1864
hydA
NAD-reducing Fe-hydrogenase, subunit HydA (EC 1.12.7.2)
Position: -187
Score: 5.5
Sequence: ATGTTATAATATTAACAA
Locus tag: Csac_2425
Name: null
Funciton: hypothetical protein
Locus tag: Csac_2424
Name: hydG
Funciton: [Fe] hydrogenase maturation protein HydG
Csac_2425
hypothetical protein
Csac_2424
hydG
[Fe] hydrogenase maturation protein HydG
Position: -45
Score: 5
Sequence: TTGTTAACAAATTAACTT
Locus tag: Csac_1534
Name: echA
Funciton: Energy-conserving Ni-Fe hydrogenase (ferredoxin), subunit A
Locus tag: Csac_1535
Name: echB
Funciton: Energy-conserving Ni-Fe hydrogenase (ferredoxin), subunit B
Locus tag: Csac_1536
Name: echC
Funciton: Energy-conserving Ni-Fe hydrogenase (ferredoxin), subunit C
Locus tag: Csac_1537
Name: echD
Funciton: Energy-conserving Ni-Fe hydrogenase (ferredoxin), subunit D
Locus tag: Csac_1538
Name: echE
Funciton: Energy-conserving Ni-Fe hydrogenase (ferredoxin), subunit E
Locus tag: Csac_1539
Name: echF
Funciton: Energy-conserving Ni-Fe hydrogenase (ferredoxin), subunit F
Locus tag: Csac_1540
Name: hypA
Funciton: [NiFe] hydrogenase nickel incorporation protein HypA
Locus tag: Csac_1541
Name: hypB
Funciton: [NiFe] hydrogenase nickel incorporation-associated protein HypB
Locus tag: Csac_1542
Name: hypF
Funciton: [NiFe] hydrogenase metallocenter assembly protein HypF
Locus tag: Csac_1543
Name: hypC
Funciton: [NiFe] hydrogenase metallocenter assembly protein HypC
Locus tag: Csac_1544
Name: hypD
Funciton: [NiFe] hydrogenase metallocenter assembly protein HypD
Locus tag: Csac_1545
Name: hypE
Funciton: [NiFe] hydrogenase metallocenter assembly protein HypE
Csac_1534
echA
Energy-conserving Ni-Fe hydrogenase (ferredoxin), subunit A
Csac_1535
echB
Energy-conserving Ni-Fe hydrogenase (ferredoxin), subunit B
Csac_1536
echC
Energy-conserving Ni-Fe hydrogenase (ferredoxin), subunit C
Csac_1537
echD
Energy-conserving Ni-Fe hydrogenase (ferredoxin), subunit D
Csac_1538
echE
Energy-conserving Ni-Fe hydrogenase (ferredoxin), subunit E
Csac_1539
echF
Energy-conserving Ni-Fe hydrogenase (ferredoxin), subunit F
Csac_1540
hypA
[NiFe] hydrogenase nickel incorporation protein HypA
Csac_1541
hypB
[NiFe] hydrogenase nickel incorporation-associated protein HypB
Csac_1542
hypF
[NiFe] hydrogenase metallocenter assembly protein HypF
Csac_1543
hypC
[NiFe] hydrogenase metallocenter assembly protein HypC
Csac_1544
hypD
[NiFe] hydrogenase metallocenter assembly protein HypD
Csac_1545
hypE
[NiFe] hydrogenase metallocenter assembly protein HypE
Position: -39
Score: 5.2
Sequence: ATGTCAAAAAAATATCAA
Locus tag: Csac_1220
Name: rex
Funciton: Redox-sensitive transcriptional regulator Rex
Csac_1220
rex
Redox-sensitive transcriptional regulator Rex
Position: -70
Score: 4.8
Sequence: TTGACAAAAAACAAACAA
Position: -53
Score: 4.7
Sequence: ATGTTTATATAATAATAA
Position: -30
Score: 5.1
Sequence: ATGTTAATTTTTTAACAG
Locus tag: Csac_0622
Name: adhA3
Funciton: Alcohol dehydrogenase (EC 1.1.1.1), iron-containing
Csac_0622
adhA3
Alcohol dehydrogenase (EC 1.1.1.1), iron-containing
Position: -46
Score: 5.6
Sequence: ATGTTAAAATTATAACAA
Locus tag: Csac_0407
Name: adhA2
Funciton: Alcohol dehydrogenase (EC 1.1.1.1), Fe-containing
Csac_0407
adhA2
Alcohol dehydrogenase (EC 1.1.1.1), Fe-containing
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