Regulon of RutR2 in Pseudomonas fluorescens Pf-5
| Regulator type: | Transcription factor |
| TF locus tag: | PFL_2545 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Pyrimidine utilization |
| Effector: | Uracil |
| Regulog: | RutR2 - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 2 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - RutR
- By TF family - TetR
- By effector - Uracil
- By pathway - Pyrimidine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -547
Score: 6.6 Sequence: TCCTGTCATCGGTGACAGGA
Locus tag: PFL_2549
Name: pydP Funciton: Pyrimidine permease in reductive pathway
Locus tag: PFL_2550
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6) |
|||
|
pydP
|
Pyrimidine permease in reductive pathway
|
||
|
pydC
|
Beta-ureidopropionase (EC 3.5.1.6)
|
||
|
Position: -94
Score: 6.5 Sequence: TCCTGTCACCGATGACAGGA
Locus tag: PFL_2548
Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2)
Locus tag: PFL_2547
Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: PFL_2546
Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1) |
|||
|
pydB
|
Dihydropyrimidinase (EC 3.5.2.2)
|
||
|
pydX
|
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
|
||
|
pydA
|
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |