Regulon of RutR4 in Pseudomonas syringae pv. tomato str. DC3000
| Regulator type: | Transcription factor |
| TF locus tag: | PSPTO1158 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Pyrimidine utilization |
| Effector: | Uracil |
| Regulog: | RutR4 - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - RutR
- By TF family - TetR
- By effector - Uracil
- By pathway - Pyrimidine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -68
Score: 5.8 Sequence: TTCAGACCAAATGGTCTGCT
Locus tag: PSPTO1157
Name: rutA Funciton: Pyrimidine oxygenase
Locus tag: PSPTO1156
Name: rutB Funciton: Peroxyureidoacrylate / ureidoacrylate amido hydrolase
Locus tag: PSPTO1155
Name: rutC Funciton: Aminoacrylate peracid reductase
Locus tag: PSPTO1154
Name: rutD Funciton: Aminoacrylate hydrolase
Locus tag: PSPTO1153
Name: rutF Funciton: Flavin reductase |
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rutA
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Pyrimidine oxygenase
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rutB
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Peroxyureidoacrylate / ureidoacrylate amido hydrolase
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rutC
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Aminoacrylate peracid reductase
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rutD
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Aminoacrylate hydrolase
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rutF
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Flavin reductase
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Position: -214
Score: 5.8 Sequence: AGCAGACCATTTGGTCTGAA
Locus tag: PSPTO1158
Name: rutR4 Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family |
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rutR4
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Transcriptional regulator RutR of pyrimidine catabolism, TetR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |