Regulon of TPP in Clostridium acetobutylicum ATCC 824

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Clostridiaceae
Under regulation:
- Genes	14
- Operons	5

Member of regulog collections

By taxonomy - Clostridiaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -156 Score: 72.3 Sequence: TTTAGTGCTAGGGGT... Locus tag: CAC1397 Name: COG0084 Funciton: TatD-related deoxyribonuclease, COG0084 Locus tag: CAC1398 Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family Locus tag: CAC1399 Name: thiX Funciton: Thiamin ABC transporter, transmembrane component Locus tag: CAC1400 Name: thiY Funciton: Thiamin ABC transporter, substrate-binding component Locus tag: CAC1401 Name: thiZ Funciton: Thiamin ABC transporter, ATPase component
	CAC1397	COG0084	TatD-related deoxyribonuclease, COG0084
	CAC1398	COG0011	Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
	CAC1399	thiX	Thiamin ABC transporter, transmembrane component
	CAC1400	thiY	Thiamin ABC transporter, substrate-binding component
	CAC1401	thiZ	Thiamin ABC transporter, ATPase component
Position: -201 Score: 72.8 Sequence: ATATGTGCTAGGGGT... Locus tag: CAC2928 Name: thiT Funciton: Substrate-specific component ThiT of thiamin ECF transporter
	CAC2928	thiT	Substrate-specific component ThiT of thiamin ECF transporter
Position: -242 Score: 55.9 Sequence: ATATTTTAGCTAGGG... Locus tag: CAC3014 Name: thiC Funciton: Thiamine biosynthesis protein ThiC
	CAC3014	thiC	Thiamine biosynthesis protein ThiC
Position: -196 Score: 53.4 Sequence: TAATATTTTTCAGGG... Locus tag: CAC3096 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: CAC3095 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	CAC3096	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	CAC3095	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Position: -212 Score: 73.8 Sequence: AATATAGTTAACGGG... Locus tag: CAC2924 Name: thiS Funciton: thiamine biosynthesis protein ThiS Locus tag: CAC2923 Name: null Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: CAC2922 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: CAC2921 Name: thiH Funciton: Thiazole biosynthesis protein ThiH Locus tag: CAC2920 Name: tenI Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	CAC2924	thiS	thiamine biosynthesis protein ThiS
	CAC2923		Sulfur carrier protein adenylyltransferase ThiF
	CAC2922	thiG	Thiazole biosynthesis protein ThiG
	CAC2921	thiH	Thiazole biosynthesis protein ThiH
	CAC2920	tenI	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD