Regulon of TPP in Clostridium acetobutylicum ATCC 824
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Clostridiaceae |
| Under regulation: | |
| - Genes | 14 |
| - Operons | 5 |
Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -156
Score: 72.3 Sequence: TTTAGTGCTAGGGGT...
Locus tag: CAC1397
Name: COG0084 Funciton: TatD-related deoxyribonuclease, COG0084
Locus tag: CAC1398
Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Locus tag: CAC1399
Name: thiX Funciton: Thiamin ABC transporter, transmembrane component
Locus tag: CAC1400
Name: thiY Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: CAC1401
Name: thiZ Funciton: Thiamin ABC transporter, ATPase component |
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COG0084
|
TatD-related deoxyribonuclease, COG0084
|
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COG0011
|
Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
|
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thiX
|
Thiamin ABC transporter, transmembrane component
|
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thiY
|
Thiamin ABC transporter, substrate-binding component
|
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thiZ
|
Thiamin ABC transporter, ATPase component
|
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Position: -201
Score: 72.8 Sequence: ATATGTGCTAGGGGT...
Locus tag: CAC2928
Name: thiT Funciton: Substrate-specific component ThiT of thiamin ECF transporter |
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thiT
|
Substrate-specific component ThiT of thiamin ECF transporter
|
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Position: -242
Score: 55.9 Sequence: ATATTTTAGCTAGGG...
Locus tag: CAC3014
Name: thiC Funciton: Thiamine biosynthesis protein ThiC |
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thiC
|
Thiamine biosynthesis protein ThiC
|
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Position: -196
Score: 53.4 Sequence: TAATATTTTTCAGGG...
Locus tag: CAC3096
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CAC3095
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
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thiM
|
Hydroxyethylthiazole kinase (EC 2.7.1.50)
|
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thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
|
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Position: -212
Score: 73.8 Sequence: AATATAGTTAACGGG...
Locus tag: CAC2924
Name: thiS Funciton: thiamine biosynthesis protein ThiS
Locus tag: CAC2923
Name: null Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: CAC2922
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: CAC2921
Name: thiH Funciton: Thiazole biosynthesis protein ThiH
Locus tag: CAC2920
Name: tenI Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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thiS
|
thiamine biosynthesis protein ThiS
|
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Sulfur carrier protein adenylyltransferase ThiF
|
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thiG
|
Thiazole biosynthesis protein ThiG
|
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thiH
|
Thiazole biosynthesis protein ThiH
|
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tenI
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |