Regulon of TPP in Clostridium botulinum A str. ATCC 3502
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Clostridiaceae |
| Under regulation: | |
| - Genes | 9 |
| - Operons | 4 |
Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -160
Score: 78.2 Sequence: TTAAGTGCTAGGGGT...
Locus tag: CBO0556
Name: thiT Funciton: Substrate-specific component ThiT of thiamin ECF transporter |
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thiT
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Substrate-specific component ThiT of thiamin ECF transporter
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Position: -409
Score: 71.3 Sequence: CCTTATGTTGTGGGG...
Locus tag: CBO0451
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CBO0450
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CBO0449
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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thiM
|
Hydroxyethylthiazole kinase (EC 2.7.1.50)
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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Position: -191
Score: 75.7 Sequence: TATGTAAATGCAGGG...
Locus tag: CBO2913
Name: purF2 Funciton: Amidophosphoribosyltransferase (EC 2.4.2.14)
Locus tag: CBO2911
Name: thiC Funciton: Thiamine biosynthesis protein ThiC
Locus tag: CBO2910
Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family |
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purF2
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Amidophosphoribosyltransferase (EC 2.4.2.14)
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thiC
|
Thiamine biosynthesis protein ThiC
|
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COG0011
|
Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
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Position: -410
Score: 54.7 Sequence: AATTTTTCAAAAGGG...
Locus tag: CBO2254
Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: CBO2253
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
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thiW
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Substrate-specific component ThiW of predicted thiazole ECF transporter
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thiM
|
Hydroxyethylthiazole kinase (EC 2.7.1.50)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |