Regulon of TPP in Clostridium novyi NT
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Clostridiaceae |
| Under regulation: | |
| - Genes | 5 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -275
Score: 77.2 Sequence: TTAAGTTGCAGGGGT...
Locus tag: NT01CX_0246
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: NT01CX_0247
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: NT01CX_0248
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
|||
|
thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
|
||
|
thiM
|
Hydroxyethylthiazole kinase (EC 2.7.1.50)
|
||
|
thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
|
||
|
Position: -202
Score: 62.9 Sequence: ATCGTTTGCGGGGGA...
Locus tag: NT01CX_0092
Name: thiC Funciton: Thiamine biosynthesis protein ThiC |
|||
|
thiC
|
Thiamine biosynthesis protein ThiC
|
||
|
Position: -317
Score: 70.4 Sequence: TTTTTAACTAGGGGT...
Locus tag: NT01CX_1441
Name: thiT Funciton: Substrate-specific component ThiT of thiamin ECF transporter |
|||
|
thiT
|
Substrate-specific component ThiT of thiamin ECF transporter
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |