Regulon of TPP in Clostridium perfringens ATCC 13124

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Clostridiaceae
Under regulation:
- Genes	12
- Operons	5

Member of regulog collections

By taxonomy - Clostridiaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -184 Score: 74 Sequence: AAAAAATAGCTAGGG... Locus tag: CPF_1545 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: CPF_1544 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: CPF_1543 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	CPF_1545	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	CPF_1544	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	CPF_1543	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -194 Score: 77 Sequence: TCATGTGCTAGGGGT... Locus tag: CPF_1622 Name: thiT Funciton: Substrate-specific component ThiT of thiamin ECF transporter
	CPF_1622	thiT	Substrate-specific component ThiT of thiamin ECF transporter
Position: -253 Score: 78.8 Sequence: GTAAGTGCTAGGGGT... Locus tag: CPF_0670 Name: thiC Funciton: Thiamine biosynthesis protein ThiC
	CPF_0670	thiC	Thiamine biosynthesis protein ThiC
Position: -232 Score: 70.2 Sequence: AAGATATTGCTAGGG... Locus tag: CPF_1856 Name: thiS Funciton: thiamine biosynthesis protein ThiS Locus tag: CPF_1855 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: CPF_1854 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: CPF_1853 Name: thiH Funciton: Thiazole biosynthesis protein ThiH Locus tag: CPF_1852 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	CPF_1856	thiS	thiamine biosynthesis protein ThiS
	CPF_1855	thiF	Sulfur carrier protein adenylyltransferase ThiF
	CPF_1854	thiG	Thiazole biosynthesis protein ThiG
	CPF_1853	thiH	Thiazole biosynthesis protein ThiH
	CPF_1852	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -321 Score: 71 Sequence: ACTTTATAGCTAGGG... Locus tag: CPF_2870 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) Locus tag: CPF_2869 Name: thiT Funciton: Substrate-specific component ThiT of thiamin ECF transporter
	CPF_2870	tenA	Thiaminase II (EC 3.5.99.2)
	CPF_2869	thiT	Substrate-specific component ThiT of thiamin ECF transporter

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD