Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of TPP in Clostridium difficile 630

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Clostridiaceae
Under regulation:
- Genes 12
- Operons 3
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -252
Score: 70.8
Sequence: ATTAGAGCTAGGGGC...
Locus tag: CD1702
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
Locus tag: CD1702A
Name: thiS
Funciton: thiamine biosynthesis protein ThiS
Locus tag: CD1703
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: CD1704
Name: thiG
Funciton: Thiazole biosynthesis protein ThiG
Locus tag: CD1705
Name: thiH
Funciton: Thiazole biosynthesis protein ThiH
Locus tag: CD1706
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiC
Thiamine biosynthesis protein ThiC
thiS
thiamine biosynthesis protein ThiS
thiF
Sulfur carrier protein adenylyltransferase ThiF
thiG
Thiazole biosynthesis protein ThiG
thiH
Thiazole biosynthesis protein ThiH
thiE
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)

Position: -191
Score: 66.8
Sequence: AAAATAGCTAGGGGA...
Locus tag: CD1599
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CD1600
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CD1601
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiD
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM
Hydroxyethylthiazole kinase (EC 2.7.1.50)
thiE
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)

Position: -496
Score: 52.7
Sequence: ATAATATATTTCGGG...
Locus tag: CD1980
Name: thiX
Funciton: Thiamin ABC transporter, transmembrane component
Locus tag: CD1979
Name: thiY
Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: CD1978
Name: thiZ
Funciton: Thiamin ABC transporter, ATPase component
thiX
Thiamin ABC transporter, transmembrane component
thiY
Thiamin ABC transporter, substrate-binding component
thiZ
Thiamin ABC transporter, ATPase component
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD