Regulon of TPP in Clostridium difficile 630

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Clostridiaceae
Under regulation:
- Genes	12
- Operons	3

Member of regulog collections

By taxonomy - Clostridiaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -252 Score: 70.8 Sequence: ATTAGAGCTAGGGGC... Locus tag: CD1702 Name: thiC Funciton: Thiamine biosynthesis protein ThiC Locus tag: CD1702A Name: thiS Funciton: thiamine biosynthesis protein ThiS Locus tag: CD1703 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: CD1704 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: CD1705 Name: thiH Funciton: Thiazole biosynthesis protein ThiH Locus tag: CD1706 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	CD1702	thiC	Thiamine biosynthesis protein ThiC
	CD1702A	thiS	thiamine biosynthesis protein ThiS
	CD1703	thiF	Sulfur carrier protein adenylyltransferase ThiF
	CD1704	thiG	Thiazole biosynthesis protein ThiG
	CD1705	thiH	Thiazole biosynthesis protein ThiH
	CD1706	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -191 Score: 66.8 Sequence: AAAATAGCTAGGGGA... Locus tag: CD1599 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: CD1600 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: CD1601 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	CD1599	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	CD1600	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	CD1601	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -496 Score: 52.7 Sequence: ATAATATATTTCGGG... Locus tag: CD1980 Name: thiX Funciton: Thiamin ABC transporter, transmembrane component Locus tag: CD1979 Name: thiY Funciton: Thiamin ABC transporter, substrate-binding component Locus tag: CD1978 Name: thiZ Funciton: Thiamin ABC transporter, ATPase component
	CD1980	thiX	Thiamin ABC transporter, transmembrane component
	CD1979	thiY	Thiamin ABC transporter, substrate-binding component
	CD1978	thiZ	Thiamin ABC transporter, ATPase component

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD