Regulon of TPP in Clostridium kluyveri DSM 555
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Clostridiaceae |
| Under regulation: | |
| - Genes | 11 |
| - Operons | 5 |
Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -164
Score: 76.2 Sequence: CTTAATGCTAGGGGT...
Locus tag: CKL_2038
Name: thiT Funciton: Substrate-specific component ThiT of thiamin ECF transporter |
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thiT
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Substrate-specific component ThiT of thiamin ECF transporter
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Position: -318
Score: 66.6 Sequence: TAATATCTTTAAGGG...
Locus tag: CKL_1639
Name: thiS Funciton: thiamine biosynthesis protein ThiS
Locus tag: CKL_1638
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: CKL_1637
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: CKL_1636
Name: thiH Funciton: Thiazole biosynthesis protein ThiH
Locus tag: CKL_1635
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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thiS
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thiamine biosynthesis protein ThiS
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thiF
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Sulfur carrier protein adenylyltransferase ThiF
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thiG
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Thiazole biosynthesis protein ThiG
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thiH
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Thiazole biosynthesis protein ThiH
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thiE
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Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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Position: -241
Score: 55.9 Sequence: ATATTATGTGCAGGG...
Locus tag: CKL_1776
Name: thiC Funciton: Thiamine biosynthesis protein ThiC |
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thiC
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Thiamine biosynthesis protein ThiC
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Position: -169
Score: 80.4 Sequence: AATAGTTTTGTGGGG...
Locus tag: CKL_2919
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CKL_2918
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CKL_2917
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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thiD
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Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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thiM
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Hydroxyethylthiazole kinase (EC 2.7.1.50)
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thiE
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Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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Position: -191
Score: 66.1 Sequence: ATAACGGACAGGGGA...
Locus tag: CKL_2891
Name: null Funciton: hypothetical protein |
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hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |