Regulon of TPP in Clostridium kluyveri DSM 555

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Clostridiaceae
Under regulation:
- Genes	11
- Operons	5

Member of regulog collections

By taxonomy - Clostridiaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -164 Score: 76.2 Sequence: CTTAATGCTAGGGGT... Locus tag: CKL_2038 Name: thiT Funciton: Substrate-specific component ThiT of thiamin ECF transporter
	CKL_2038	thiT	Substrate-specific component ThiT of thiamin ECF transporter
Position: -318 Score: 66.6 Sequence: TAATATCTTTAAGGG... Locus tag: CKL_1639 Name: thiS Funciton: thiamine biosynthesis protein ThiS Locus tag: CKL_1638 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: CKL_1637 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: CKL_1636 Name: thiH Funciton: Thiazole biosynthesis protein ThiH Locus tag: CKL_1635 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	CKL_1639	thiS	thiamine biosynthesis protein ThiS
	CKL_1638	thiF	Sulfur carrier protein adenylyltransferase ThiF
	CKL_1637	thiG	Thiazole biosynthesis protein ThiG
	CKL_1636	thiH	Thiazole biosynthesis protein ThiH
	CKL_1635	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -241 Score: 55.9 Sequence: ATATTATGTGCAGGG... Locus tag: CKL_1776 Name: thiC Funciton: Thiamine biosynthesis protein ThiC
	CKL_1776	thiC	Thiamine biosynthesis protein ThiC
Position: -169 Score: 80.4 Sequence: AATAGTTTTGTGGGG... Locus tag: CKL_2919 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: CKL_2918 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: CKL_2917 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	CKL_2919	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	CKL_2918	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	CKL_2917	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -191 Score: 66.1 Sequence: ATAACGGACAGGGGA... Locus tag: CKL_2891 Name: null Funciton: hypothetical protein
	CKL_2891		hypothetical protein

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD