Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PhnR in Pseudomonas syringae pv. tomato str. DC3000

Properties
Regulator type: Transcription factor
TF locus tag: PSPTO3877
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Phosphonate utilization; 2-aminoethylphosphonate utilization
Effector:
Regulog: PhnR - Pseudomonadaceae
Statistics of regulated genes:
- Genes 7
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 30 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -304
Score: 4.7
Sequence: TGGTCTAGATCA
Position: -24
Score: 5.3
Sequence: TGGTCTAGTCCA
Locus tag: PSPTO3877
Name: phnR
Funciton: 2-aminoethylphosphonate uptake and metabolism regulator, GntR family
phnR
2-aminoethylphosphonate uptake and metabolism regulator, GntR family

Position: -345
Score: 5.4
Sequence: TGGACTAGACCA
Position: -65
Score: 5.4
Sequence: TGATCTAGACCA
Locus tag: PSPTO3878
Name: phnS
Funciton: 2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1)
Locus tag: PSPTO3879
Name: PF01663
Funciton: type I phosphodiesterase
Locus tag: PSPTO3880
Name: phnU
Funciton: 2-aminoethylphosphonate ABC transporter, permease protein I (TC 3.A.1.9.1)
Locus tag: PSPTO3881
Name: phnV
Funciton: 2-aminoethylphosphonate ABC transporter, permease protein II (TC 3.A.1.9.1)
Locus tag: PSPTO3882
Name: phnT
Funciton: 2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1)
Locus tag: PSPTO3883
Name: COG0560
Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
phnS
2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1)
PF01663
type I phosphodiesterase
phnU
2-aminoethylphosphonate ABC transporter, permease protein I (TC 3.A.1.9.1)
phnV
2-aminoethylphosphonate ABC transporter, permease protein II (TC 3.A.1.9.1)
phnT
2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1)
COG0560
Phosphoserine phosphatase (EC 3.1.3.3)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD