Regulon of PhnR in Pseudomonas syringae pv. tomato str. DC3000

Properties
Regulator type:	Transcription factor
TF locus tag:	PSPTO3877
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Phosphonate utilization; 2-aminoethylphosphonate utilization
Effector:
Regulog:	PhnR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	7
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 30 sites [see more]

Member of regulog collections

By trascription factor - PhnR
By taxonomy - Pseudomonadaceae
By TF family - GntR/Others
By pathway - Phosphonate utilization
By pathway - 2-aminoethylphosphonate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -304 Score: 4.7 Sequence: TGGTCTAGATCA Position: -24 Score: 5.3 Sequence: TGGTCTAGTCCA Locus tag: PSPTO3877 Name: phnR Funciton: 2-aminoethylphosphonate uptake and metabolism regulator, GntR family
	PSPTO3877	phnR	2-aminoethylphosphonate uptake and metabolism regulator, GntR family
Position: -345 Score: 5.4 Sequence: TGGACTAGACCA Position: -65 Score: 5.4 Sequence: TGATCTAGACCA Locus tag: PSPTO3878 Name: phnS Funciton: 2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1) Locus tag: PSPTO3879 Name: PF01663 Funciton: type I phosphodiesterase Locus tag: PSPTO3880 Name: phnU Funciton: 2-aminoethylphosphonate ABC transporter, permease protein I (TC 3.A.1.9.1) Locus tag: PSPTO3881 Name: phnV Funciton: 2-aminoethylphosphonate ABC transporter, permease protein II (TC 3.A.1.9.1) Locus tag: PSPTO3882 Name: phnT Funciton: 2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1) Locus tag: PSPTO3883 Name: COG0560 Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
	PSPTO3878	phnS	2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1)
	PSPTO3879	PF01663	type I phosphodiesterase
	PSPTO3880	phnU	2-aminoethylphosphonate ABC transporter, permease protein I (TC 3.A.1.9.1)
	PSPTO3881	phnV	2-aminoethylphosphonate ABC transporter, permease protein II (TC 3.A.1.9.1)
	PSPTO3882	phnT	2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1)
	PSPTO3883	COG0560	Phosphoserine phosphatase (EC 3.1.3.3)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD