Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PhnF in Burkholderia phymatum STM815

Properties
Regulator type: Transcription factor
TF locus tag: Bphy_3772
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Phosphonate utilization
Effector:
Regulog: PhnF - Burkholderia
Statistics of regulated genes:
- Genes 13
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 15 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -128
Score: 6.8
Sequence: TCTAAACGTCTAGACGTTTGTA
Locus tag: Bphy_3772
Name: phnF
Funciton: Transcriptional regulator for phosphonate utilization, GntR family
Locus tag: Bphy_3771
Name: rcsF
Funciton: Protein RcsF involved in phosphonates utilization
Locus tag: Bphy_3770
Name: phnN
Funciton: Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming)
phnF
Transcriptional regulator for phosphonate utilization, GntR family
rcsF
Protein RcsF involved in phosphonates utilization
phnN
Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming)

Position: -90
Score: 6.8
Sequence: TACAAACGTCTAGACGTTTAGA
Locus tag: Bphy_3773
Name: phnG
Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
Locus tag: Bphy_3774
Name: phnH
Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
Locus tag: Bphy_3775
Name: phnI
Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
Locus tag: Bphy_3776
Name: phnJ
Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
Locus tag: Bphy_3777
Name: phnK
Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
Locus tag: Bphy_3778
Name: phnL
Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
Locus tag: Bphy_3779
Name: phnM
Funciton: Alpha-D-ribose-1-methylphosphonate-5-triphosphate hydrolase
phnG
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
phnH
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
phnI
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
phnJ
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
phnK
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
phnL
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
phnM
Alpha-D-ribose-1-methylphosphonate-5-triphosphate hydrolase

Position: -111
Score: 4.7
Sequence: TGCAAAGATATAGTCGTCTAGA
Position: -103
Score: 4.9
Sequence: TATAGTCGTCTAGATGTTGCGA
Locus tag: Bphy_4623
Name: phnC
Funciton: Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)
Locus tag: Bphy_4622
Name: phnD
Funciton: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
Locus tag: Bphy_4621
Name: phnE
Funciton: Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1)
phnC
Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)
phnD
Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
phnE
Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1)
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