Profile of regulator PhnF in Burkholderia
Properties
| Regulator family: |
GntR/Others |
| Regulation mode: |
repressor |
| Biological process: |
Phosphonate utilization |
| Effector: |
|
| Regulog: |
PhnF - Burkholderia |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Burkholderia pseudomallei K96243
|
|
BPSL2850 |
phnC |
-61 |
5.3 |
GAAAAACATCTAGACGTATATA |
|
BPSL2850 |
phnC |
-53 |
5.3 |
TCTAGACGTATATACGGATTCA |
|
BPSL2857 |
phnG |
-66 |
6.9 |
TATAGACGTCTAGACGTTTAGA |
|
BPSL2858 |
phnF |
-88 |
6.9 |
TCTAAACGTCTAGACGTCTATA |
|
Burkholderia mallei ATCC 23344
|
|
BMA2407 |
phnC |
-109 |
5.3 |
GAAAAACATCTAGACGTATATA |
|
BMA2407 |
phnC |
-101 |
5.3 |
TCTAGACGTATATACGGATTCA |
|
BMA2400 |
phnG |
-66 |
6.9 |
TATAGACGTCTAGACGTTTAGA |
|
BMA2399 |
phnF |
-130 |
6.9 |
TCTAAACGTCTAGACGTCTATA |
|
Burkholderia xenovorans LB400
|
|
Bxe_B2179 |
phnG |
-68 |
7.3 |
CCTAAACGTCTAGACGTTTAGA |
|
Bxe_B2178 |
phnF |
-135 |
7.3 |
TCTAAACGTCTAGACGTTTAGG |
|
Bxe_B0839 |
phnC |
-104 |
5.4 |
TATAGTCGTCTAGACGTTGCGA |
|
Burkholderia phymatum STM815
|
|
Bphy_4623 |
phnC |
-111 |
4.7 |
TGCAAAGATATAGTCGTCTAGA |
|
Bphy_3773 |
phnG |
-90 |
6.8 |
TACAAACGTCTAGACGTTTAGA |
|
Bphy_3772 |
phnF |
-128 |
6.8 |
TCTAAACGTCTAGACGTTTGTA |
|
Bphy_4623 |
phnC |
-103 |
4.9 |
TATAGTCGTCTAGATGTTGCGA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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|
