Regulon of LiuQ in Methylibium petroleiphilum PM1

Properties
Regulator type:	Transcription factor
TF locus tag:	Mpe_A3361
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuQ - Comamonadaceae
Statistics of regulated genes:
- Genes	6
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 8 sites [see more]

Member of regulog collections

By trascription factor - LiuQ
By taxonomy - Comamonadaceae
By TF family - TetR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -176 Score: 5.1 Sequence: ATGAGTTTCACTCAA Position: -75 Score: 5.4 Sequence: TTGAGCTTTACTCAA Locus tag: Mpe_A3361 Name: liuQ Funciton: Predicted transcriptional regulator LiuQ of leucine degradation pathway, TetR family
	Mpe_A3361	liuQ	Predicted transcriptional regulator LiuQ of leucine degradation pathway, TetR family
Position: -114 Score: 5.4 Sequence: TTGAGTAAAGCTCAA Position: -13 Score: 5.1 Sequence: TTGAGTGAAACTCAT Locus tag: Mpe_A3360 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) Locus tag: Mpe_A3359 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: Mpe_A3358 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: Mpe_A3357 Name: null Funciton: Probable transmembrane protein Locus tag: Mpe_A3356 Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
	Mpe_A3360	liuA	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	Mpe_A3359	liuB	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
	Mpe_A3358	liuC	Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
	Mpe_A3357		Probable transmembrane protein
	Mpe_A3356	liuD	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD