Regulon of FadP in Burkholderia phymatum STM815

Properties
Regulator type:	Transcription factor
TF locus tag:	Bphy_0384
Regulator family:	TetR
Regulation mode:
Biological process:	Fatty acid degradation
Effector:
Regulog:	FadP - Burkholderia
Statistics of regulated genes:
- Genes	20
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 63 sites [see more]

Member of regulog collections

By trascription factor - FadP
By taxonomy - Burkholderia
By TF family - TetR
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -37 Score: 5.3 Sequence: TAGCACGACCATTCGA Locus tag: Bphy_2685 Name: fadD1 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	Bphy_2685	fadD1	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -112 Score: 5.4 Sequence: TGGCACGATCGTTCGA Locus tag: Bphy_0524 Name: fadD2 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	Bphy_0524	fadD2	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -102 Score: 5.7 Sequence: TAGAACGATCGTGCTA Locus tag: Bphy_1567 Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
	Bphy_1567	etfD	Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -50 Score: 5.2 Sequence: TGGTACGACCGTTCGA Locus tag: Bphy_0384 Name: fadP Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family Locus tag: Bphy_0385 Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) Locus tag: Bphy_0386 Name: acdB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Locus tag: Bphy_0387 Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Locus tag: Bphy_0388 Name: echH Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	Bphy_0384	fadP	Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
	Bphy_0385	acdH	Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Bphy_0386	acdB	Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
	Bphy_0387	acdA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	Bphy_0388	echH	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -117 Score: 5.6 Sequence: TCGAACGATCGTTCTT Locus tag: Bphy_0157 Name: nppD Funciton: 2-nitropropane dioxygenase NPD
	Bphy_0157	nppD	2-nitropropane dioxygenase NPD
Position: -139 Score: 5.5 Sequence: TAGCACGACCGTTCGC Locus tag: Bphy_0762 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: Bphy_0763 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit Locus tag: Bphy_0764 Name: acdH2 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Bphy_0762	etfB	Electron transfer flavoprotein, beta subunit
	Bphy_0763	etfA	Electron transfer flavoprotein, alpha subunit
	Bphy_0764	acdH2	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -131 Score: 5.3 Sequence: TTGAACGATCGTGCTT Locus tag: Bphy_1028 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: Bphy_1029 Name: pncA Funciton: Nicotinamidase (EC 3.5.1.19) Locus tag: Bphy_1030 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	Bphy_1028	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	Bphy_1029	pncA	Nicotinamidase (EC 3.5.1.19)
	Bphy_1030	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Position: -60 Score: 4.9 Sequence: GCGAACGACCGTTCAT Locus tag: Bphy_1993 Name: null Funciton: Conserved hypothetical protein DUF1178 Locus tag: Bphy_1992 Name: acdQ Funciton: Acyl-CoA dehydrogenase domain protein Locus tag: Bphy_1991 Name: acdP Funciton: acyl-CoA dehydrogenase domain-containing protein Locus tag: Bphy_1990 Name: maoC Funciton: Putative (R)-specific enoyl-CoA hydratase, MaoC- like Locus tag: Bphy_1989 Name: echI Funciton: MaoC domain protein dehydratase
	Bphy_1993		Conserved hypothetical protein DUF1178
	Bphy_1992	acdQ	Acyl-CoA dehydrogenase domain protein
	Bphy_1991	acdP	acyl-CoA dehydrogenase domain-containing protein
	Bphy_1990	maoC	Putative (R)-specific enoyl-CoA hydratase, MaoC- like
	Bphy_1989	echI	MaoC domain protein dehydratase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of FadP in Burkholderia phymatum STM815

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --