Regulon of FadP in Burkholderia cepacia AMMD

Properties
Regulator type:	Transcription factor
TF locus tag:	Bamb_2773
Regulator family:	TetR
Regulation mode:
Biological process:	Fatty acid degradation
Effector:
Regulog:	FadP - Burkholderia
Statistics of regulated genes:
- Genes	16
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 63 sites [see more]

Member of regulog collections

By trascription factor - FadP
By taxonomy - Burkholderia
By TF family - TetR
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -104 Score: 5.7 Sequence: TAGAACGATCGTGCTA Locus tag: Bamb_1346 Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
	Bamb_1346	etfD	Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -59 Score: 5.2 Sequence: TGGCACGATCGTTCGC Locus tag: Bamb_2606 Name: fadD2 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	Bamb_2606	fadD2	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -39 Score: 5.3 Sequence: TAGCACGACCATTCGA Locus tag: Bamb_0451 Name: fadD1 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	Bamb_0451	fadD1	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -51 Score: 5.3 Sequence: TAGTACGGCCGTTCGA Locus tag: Bamb_2773 Name: fadP Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
	Bamb_2773	fadP	Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Position: -116 Score: 5.3 Sequence: TTGAACGACCGTGCTT Locus tag: Bamb_1894 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: Bamb_1893 Name: pncA Funciton: Nicotinamidase (EC 3.5.1.19) Locus tag: Bamb_1892 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	Bamb_1894	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	Bamb_1893	pncA	Nicotinamidase (EC 3.5.1.19)
	Bamb_1892	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Position: -136 Score: 5.5 Sequence: TCGCACGACCGTTCGT Locus tag: Bamb_3013 Name: nppD Funciton: 2-nitropropane dioxygenase NPD
	Bamb_3013	nppD	2-nitropropane dioxygenase NPD
Position: -144 Score: 5.6 Sequence: TAGAACGACCGTTCGC Locus tag: Bamb_0938 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: Bamb_0939 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit
	Bamb_0938	etfB	Electron transfer flavoprotein, beta subunit
	Bamb_0939	etfA	Electron transfer flavoprotein, alpha subunit
Position: -196 Score: 4.8 Sequence: CAGAACGGCCATTCGA Locus tag: Bamb_3540 Name: null Funciton: Acetyl-CoA hydrolase (EC 3.1.2.1)
	Bamb_3540		Acetyl-CoA hydrolase (EC 3.1.2.1)
Position: -62 Score: 5.4 Sequence: TAGCACGATCGTTCAC Locus tag: Bamb_2271 Name: null Funciton: Conserved hypothetical protein DUF1178 Locus tag: Bamb_2270 Name: acdQ Funciton: Acyl-CoA dehydrogenase domain protein Locus tag: Bamb_2269 Name: acdP Funciton: acyl-CoA dehydrogenase domain-containing protein Locus tag: Bamb_2268 Name: maoC Funciton: Putative (R)-specific enoyl-CoA hydratase, MaoC- like Locus tag: Bamb_2267 Name: echI Funciton: MaoC domain protein dehydratase
	Bamb_2271		Conserved hypothetical protein DUF1178
	Bamb_2270	acdQ	Acyl-CoA dehydrogenase domain protein
	Bamb_2269	acdP	acyl-CoA dehydrogenase domain-containing protein
	Bamb_2268	maoC	Putative (R)-specific enoyl-CoA hydratase, MaoC- like
	Bamb_2267	echI	MaoC domain protein dehydratase

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of FadP in Burkholderia cepacia AMMD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --