Regulon of FadP in Burkholderia mallei ATCC 23344
| Regulator type: | Transcription factor |
| TF locus tag: | BMA0196 |
| Regulator family: | TetR |
| Regulation mode: | |
| Biological process: | Fatty acid degradation |
| Effector: | |
| Regulog: | FadP - Burkholderia |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - FadP
- By taxonomy - Burkholderia
- By TF family - TetR
- By pathway - Fatty acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -52
Score: 5.3 Sequence: TAGTACGGCCGTTCGA
Locus tag: BMA0196
Name: fadP Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Locus tag: BMA0197
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: BMA0198
Name: acdB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
Locus tag: BMA0199
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: BMA0200
Name: echH Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) |
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fadP
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Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
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acdH
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Acyl-CoA dehydrogenase (EC 1.3.99.3)
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acdB
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Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
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acdA
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3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
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echH
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Enoyl-CoA hydratase (EC 4.2.1.17)
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Position: -148
Score: 5.4 Sequence: TTGAACGACCGTTCTT
Locus tag: BMA1438
Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Locus tag: BMA1437
Name: pncA Funciton: Nicotinamidase (EC 3.5.1.19)
Locus tag: BMA1436
Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) |
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fadB
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Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
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pncA
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Nicotinamidase (EC 3.5.1.19)
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fadA
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3-ketoacyl-CoA thiolase (EC 2.3.1.16)
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Position: -147
Score: 5.6 Sequence: TAGAACGACCGTTCGC
Locus tag: BMA0411
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: BMA0410
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit |
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etfB
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Electron transfer flavoprotein, beta subunit
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etfA
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Electron transfer flavoprotein, alpha subunit
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Position: -104
Score: 5.7 Sequence: TAGAACGATCGTGCTA
Locus tag: BMA1116
Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
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etfD
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Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
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Position: -60
Score: 5.4 Sequence: TAGCACGGTCGTTCAA
Locus tag: BMA1813
Name: null Funciton: Conserved hypothetical protein DUF1178 |
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Conserved hypothetical protein DUF1178
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |