Regulon of FadP in Burkholderia pseudomallei K96243

Properties
Regulator type:	Transcription factor
TF locus tag:	BPSL0647
Regulator family:	TetR
Regulation mode:
Biological process:	Fatty acid degradation
Effector:
Regulog:	FadP - Burkholderia
Statistics of regulated genes:
- Genes	19
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 63 sites [see more]

Member of regulog collections

By trascription factor - FadP
By taxonomy - Burkholderia
By TF family - TetR
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -39 Score: 5.3 Sequence: TAGCACGACCATTCGA Locus tag: BPSL3037 Name: fadD1 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	BPSL3037	fadD1	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -52 Score: 5.3 Sequence: TAGTACGGCCGTTCGA Locus tag: BPSL0647 Name: fadP Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family Locus tag: BPSL0648 Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) Locus tag: BPSL0649 Name: acdB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Locus tag: BPSL0650 Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Locus tag: BPSL0651 Name: echH Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	BPSL0647	fadP	Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
	BPSL0648	acdH	Acyl-CoA dehydrogenase (EC 1.3.99.3)
	BPSL0649	acdB	Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
	BPSL0650	acdA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	BPSL0651	echH	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -147 Score: 5.6 Sequence: TAGAACGACCGTTCGC Locus tag: BPSL2500 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: BPSL2499 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit Locus tag: BPSL2498 Name: acdH2 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	BPSL2500	etfB	Electron transfer flavoprotein, beta subunit
	BPSL2499	etfA	Electron transfer flavoprotein, alpha subunit
	BPSL2498	acdH2	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -148 Score: 5.4 Sequence: TTGAACGACCGTTCTT Locus tag: BPSL1424 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: BPSL1425 Name: pncA Funciton: Nicotinamidase (EC 3.5.1.19) Locus tag: BPSL1426 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	BPSL1424	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	BPSL1425	pncA	Nicotinamidase (EC 3.5.1.19)
	BPSL1426	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Position: -154 Score: 5.2 Sequence: TGGCACGACCGTTCGT Locus tag: BPSL0328 Name: nppD Funciton: 2-nitropropane dioxygenase NPD
	BPSL0328	nppD	2-nitropropane dioxygenase NPD
Position: -104 Score: 5.7 Sequence: TAGAACGATCGTGCTA Locus tag: BPSL1961 Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
	BPSL1961	etfD	Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -60 Score: 5.4 Sequence: TAGCACGGTCGTTCAA Locus tag: BPSL1227 Name: null Funciton: Conserved hypothetical protein DUF1178 Locus tag: BPSL1228 Name: acdQ Funciton: Acyl-CoA dehydrogenase domain protein Locus tag: BPSL1229 Name: acdP Funciton: acyl-CoA dehydrogenase domain-containing protein Locus tag: BPSL1230 Name: maoC Funciton: Putative (R)-specific enoyl-CoA hydratase, MaoC- like Locus tag: BPSL1231 Name: echI Funciton: MaoC domain protein dehydratase
	BPSL1227		Conserved hypothetical protein DUF1178
	BPSL1228	acdQ	Acyl-CoA dehydrogenase domain protein
	BPSL1229	acdP	acyl-CoA dehydrogenase domain-containing protein
	BPSL1230	maoC	Putative (R)-specific enoyl-CoA hydratase, MaoC- like
	BPSL1231	echI	MaoC domain protein dehydratase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of FadP in Burkholderia pseudomallei K96243

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --