Regulon of RutR in Burkholderia cepacia AMMD

Properties
Regulator type:	Transcription factor
TF locus tag:	Bamb_5968
Regulator family:	TetR
Regulation mode:	repressor (activator)
Biological process:	Pyrimidine utilization
Effector:	Uracil
Regulog:	RutR - Burkholderia
Statistics of regulated genes:
- Genes	6
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 12 sites [see more]

Member of regulog collections

By trascription factor - RutR
By taxonomy - Burkholderia
By TF family - TetR
By effector - Uracil
By pathway - Pyrimidine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -188 Score: 6.8 Sequence: ACCTGTCCAATCGGACAGGA Locus tag: Bamb_5967 Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6) Locus tag: Bamb_5966 Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism Locus tag: Bamb_5965 Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1) Locus tag: Bamb_5964 Name: pydP Funciton: Pyrimidine permease in reductive pathway Locus tag: Bamb_5963 Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2)
	Bamb_5967	pydC	Beta-ureidopropionase (EC 3.5.1.6)
	Bamb_5966	pydX	Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
	Bamb_5965	pydA	Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1)
	Bamb_5964	pydP	Pyrimidine permease in reductive pathway
	Bamb_5963	pydB	Dihydropyrimidinase (EC 3.5.2.2)
Position: -195 Score: 7 Sequence: TCCTGTCCGATTGGACAGGT Locus tag: Bamb_5968 Name: rutR Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
	Bamb_5968	rutR	Transcriptional regulator RutR of pyrimidine catabolism, TetR family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD