Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of FMN in Clostridium difficile 630

Properties
Regulator type: RNA regulatory element
Name: FMN
RFAM: RF00050
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Regulog: FMN - Clostridiaceae
Under regulation:
- Genes 6
- Operons 3
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -254
Score: 118.8
Sequence: ACTTAATCTTCGGGG...
Locus tag: CD1700
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: CD1699
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: CD1698
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: CD1697
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
CD1700
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
CD1699
ribE
Riboflavin synthase alpha chain (EC 2.5.1.9)
CD1698
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
CD1697
ribH
6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
Position: -289
Score: 97.5
Sequence: TTTTTCTTCATAAAC...
Locus tag: CD3299
Name: ribZ
Funciton: Riboflavin transporter, COG2814 family
CD3299
ribZ
Riboflavin transporter, COG2814 family
Position: -268
Score: 123.2
Sequence: AAGATCTTCGGGGCA...
Locus tag: CD0147
Name: ribU
Funciton: Substrate-specific component RibU of riboflavin ECF transporter
CD0147
ribU
Substrate-specific component RibU of riboflavin ECF transporter
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