Regulon of Cobalamin in Clostridium scindens ATCC 35704

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Clostridiaceae
Under regulation:
- Genes	12
- Operons	2

Member of regulog collections

By taxonomy - Clostridiaceae
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -376 Score: 65.3 Sequence: ACTTATTGTGGTCAT... Locus tag: CLOSCI_03609 Name: cbiM Funciton: Substrate-specific component CbiM of cobalt ECF transporter Locus tag: CLOSCI_03610 Name: cbiN Funciton: Additional substrate-specific component CbiN of cobalt ECF transporter Locus tag: CLOSCI_03611 Name: cbiQ Funciton: Transmembrane component CbiQ of energizing module of cobalt ECF transporter Locus tag: CLOSCI_03612 Name: cbiO Funciton: ATPase component CbiO of energizing module of cobalt ECF transporter
	CLOSCI_03609	cbiM	Substrate-specific component CbiM of cobalt ECF transporter
	CLOSCI_03610	cbiN	Additional substrate-specific component CbiN of cobalt ECF transporter
	CLOSCI_03611	cbiQ	Transmembrane component CbiQ of energizing module of cobalt ECF transporter
	CLOSCI_03612	cbiO	ATPase component CbiO of energizing module of cobalt ECF transporter
Position: -248 Score: 109.7 Sequence: TAATAACAGTAACGT... Locus tag: CLOSCI_02169 Name: cobW Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family Locus tag: CLOSCI_02168 Name: mtbC Funciton: Dimethylamine corrinoid protein 2 Locus tag: CLOSCI_02167 Name: hemE Funciton: hypothetical protein Locus tag: CLOSCI_02166 Name: CBO1493 Funciton: Methylcobalamin:coenzyme M methyltransferase, methylamine-specific Locus tag: CLOSCI_02165 Name: mtbC Funciton: Dimethylamine corrinoid protein 2 Locus tag: CLOSCI_02164 Name: mtbA Funciton: Methylcobalamin:coenzyme M methyltransferase, methylamine-specific Locus tag: CLOSCI_02163 Name: CBO1491 Funciton: probable electron transfer protein Locus tag: CLOSCI_02162 Name: hemE Funciton: hypothetical protein
	CLOSCI_02169	cobW	Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
	CLOSCI_02168	mtbC	Dimethylamine corrinoid protein 2
	CLOSCI_02167	hemE	hypothetical protein
	CLOSCI_02166	CBO1493	Methylcobalamin:coenzyme M methyltransferase, methylamine-specific
	CLOSCI_02165	mtbC	Dimethylamine corrinoid protein 2
	CLOSCI_02164	mtbA	Methylcobalamin:coenzyme M methyltransferase, methylamine-specific
	CLOSCI_02163	CBO1491	probable electron transfer protein
	CLOSCI_02162	hemE	hypothetical protein

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
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