Regulon of Cobalamin in Clostridium butyricum 5521

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Clostridiaceae
Under regulation:
- Genes	18
- Operons	2

Member of regulog collections

By taxonomy - Clostridiaceae
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -357 Score: 110.9 Sequence: TAATAAATATGATTA... Locus tag: CBY_3393 Name: cbiK Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Locus tag: CBY_3394 Name: cbiA Funciton: Cobyrinic acid A,C-diamide synthase Locus tag: CBY_3395 Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Locus tag: CBY_3396 Name: null Funciton: hypothetical protein Locus tag: CBY_3397 Name: cbiD Funciton: Cobalt-precorrin-6 synthase, anaerobic Locus tag: CBY_3398 Name: cbiE Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) Locus tag: CBY_3399 Name: cbiT Funciton: Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) Locus tag: CBY_3400 Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) Locus tag: CBY_3401 Name: cbiF Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) Locus tag: CBY_3402 Name: cbiG Funciton: Cobalamin biosynthesis protein CbiG Locus tag: CBY_3403 Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase Locus tag: CBY_3404 Name: cbiJ Funciton: Cobalt-precorrin-6x reductase (EC 1.3.1.54) Locus tag: CBY_3405 Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase Locus tag: CBY_3406 Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Locus tag: CBY_3407 Name: cbiP Funciton: Cobyric acid synthase Locus tag: CBY_3408 Name: null Funciton: hypothetical protein
	CBY_3393	cbiK	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
	CBY_3394	cbiA	Cobyrinic acid A,C-diamide synthase
	CBY_3395	cbiC	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
	CBY_3396		hypothetical protein
	CBY_3397	cbiD	Cobalt-precorrin-6 synthase, anaerobic
	CBY_3398	cbiE	Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)
	CBY_3399	cbiT	Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
	CBY_3400	cbiL	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
	CBY_3401	cbiF	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
	CBY_3402	cbiG	Cobalamin biosynthesis protein CbiG
	CBY_3403	cbiH	Cobalt-precorrin-3b C17-methyltransferase
	CBY_3404	cbiJ	Cobalt-precorrin-6x reductase (EC 1.3.1.54)
	CBY_3405	cbiB	Adenosylcobinamide-phosphate synthase
	CBY_3406	cobD	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
	CBY_3407	cbiP	Cobyric acid synthase
	CBY_3408		hypothetical protein
Position: -417 Score: 102.4 Sequence: CAAAAATATAATTAT... Locus tag: CBY_1415 Name: cbiM Funciton: Substrate-specific component CbiM of cobalt ECF transporter Locus tag: CBY_1414 Name: cbiN Funciton: Additional substrate-specific component CbiN of cobalt ECF transporter
	CBY_1415	cbiM	Substrate-specific component CbiM of cobalt ECF transporter
	CBY_1414	cbiN	Additional substrate-specific component CbiN of cobalt ECF transporter

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Cobalamin in Clostridium butyricum 5521

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --