Regulon of Cobalamin in Clostridium bolteae ATCC BAA-613
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Regulog: | Cobalamin - Clostridiaceae |
| Under regulation: | |
| - Genes | 6 |
| - Operons | 1 |
Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -325
Score: 104.9 Sequence: CGAACATAACCGTAT...
Locus tag: CLOBOL_07302
Name: nikA Funciton: nickel ABC transporter, periplasmic nickel-binding protein
Locus tag: CLOBOL_07303
Name: nikB Funciton: nickel ABC transporter, permease subunit NikB
Locus tag: CLOBOL_07304
Name: nikC Funciton: nickel ABC transporter, permease subunit NikC
Locus tag: CLOBOL_07305
Name: dppD Funciton: oligopeptide transport ATP-binding protein OppD
Locus tag: CLOBOL_07306
Name: dppD Funciton: oligopeptide transport ATP-binding protein OppD
Locus tag: CLOBOL_07307
Name: metE Funciton: hypothetical protein |
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nikA
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nickel ABC transporter, periplasmic nickel-binding protein
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nikB
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nickel ABC transporter, permease subunit NikB
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nikC
|
nickel ABC transporter, permease subunit NikC
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dppD
|
oligopeptide transport ATP-binding protein OppD
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dppD
|
oligopeptide transport ATP-binding protein OppD
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metE
|
hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |