Regulon of PsrA in Aeromonas hydrophila subsp. hydrophila ATCC 7966

Properties
Regulator type:	Transcription factor
TF locus tag:	AHA_1345
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid degradation
Effector:	Oleate
Regulog:	PsrA - Psychromonadaceae/Aeromonadales
Statistics of regulated genes:
- Genes	7
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 19 sites [see more]

Member of regulog collections

By taxonomy - Psychromonadaceae/Aeromonadales
By trascription factor - PsrA
By TF family - TetR
By effector - Oleate
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -123 Score: 5.1 Sequence: TGTTAAACGAATGTTTTAAA Position: -110 Score: 4.8 Sequence: TTTTAAATAGGTGTTGAAAT Locus tag: AHA_0139 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: AHA_0138 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	AHA_0139	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	AHA_0138	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Position: -182 Score: 5 Sequence: GTCCAAACATTTGTTTGAAA Locus tag: AHA_3357 Name: fadH Funciton: 2,4-dienoyl-CoA reductase (EC 1.3.1.34)
	AHA_3357	fadH	2,4-dienoyl-CoA reductase (EC 1.3.1.34)
Position: -100 Score: 4.8 Sequence: TTTCAATCAGCCGTATGAAA Locus tag: AHA_2153 Name: fadI Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Locus tag: AHA_2154 Name: fadJ Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	AHA_2153	fadI	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	AHA_2154	fadJ	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Position: -30 Score: 5.4 Sequence: TTTTAAACATTCGTTTAAGT Locus tag: AHA_1345 Name: psrA Funciton: Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family Locus tag: AHA_1346 Name: fadE1 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	AHA_1345	psrA	Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
	AHA_1346	fadE1	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD